Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0815 ATGGAACTCAACCTCTGCGTGAACTACCATAACCGTCACGCTTTCAGATTCACTTCTCCTTCCGCCTTCTCTCTCTCCACTCTCCGTTCCGTCCGCACTCACTTCCTCGGTTCCGCCCACACTCTCCGTCCTCCACTACCGCCTCTTCAATCTCGCAAGAAATGCAACAGGTTGGGGCTTCTCCGCCTCCACTCACCGCGCTTCGTCTTCAAGGCTTCTTTGCAATCTCACTCTCTCATCGTCGTTGTCGTCCTCGTCACCTTATCCGCCGTTTCTATCCTCCGATTCACTCTCAATAACCGAAAGAAGTCTCGCAATCAGACACGTGGACATGCAAAATTTGCATTATCGCGACAAGGAAGTAATGTGGGGAACCAGGTCATTGAAAGCCAGATTCTCGGTTTTCCAGAATTTCAAAGGGATAACCCGTTGAGTGAAATTGGAAATTTAACAGATCACAATGCAGAAGATAACCATATTCTCGAGGACAAAGAGTCTCAGCTTCCGTTATTGAAATCTTCATTGGTTCACGAAGCATCCTTCATGACCAACATATCAGAGTCATCTACTCCTGTTCTTGACTCCAGTTTCAATAATAGTAGTTCGAGGGTTTTAGAAGAGTCTATTTTGCCAGATGCTTTCCAATCAACTGTGTTGCAACCTCTAGCTTTTGCTGAAGAAATGGCTTTACAAGTAGAAGAAAATCAAGATCAAGTTGACTCTGATCCTGAGTCACCTTTGACTATAGTTAAATCTGAGCATACCACTTCTTCTGTTGGTATAAACAATGAACTCACAACAATCGATGAACAAACTAAAGAAAACATTGATGCCATCAGCTTTGATGTCCTTTTCGGTGAATCAGCGAGGCAAGAGCTGTACATGTTTTATGAGGATAACAAGTCTACAGTTGGGTCCATGTCACCACTTAGTAGTCTAAAGTCGTTATCTCTTCATGCTTCAACTAATAATGTTAAAGGATTGCCCTCAACAATGAGAAATACCACACTAAAAGGATCAGATATCTCAACAGAAATTTCTCCACAAGAATATATTGAAGGAGTGGTACCAATTTCCAGTCACACAGAAGGCTACACTCCACAAAATGGAAGTAAACACTCGAGGAAAGGTGGCAGAGCTCTGCCTGCCAAAGTTTTTCCCAACAATGGCCACTCAATCAACATGCAATTTGATCAGAAAAGTGATCAAACAAGGGTGGAGGATGATCAGAAGAATGACCATTCAGATTATCTGAGCAGATATAATAAGCTGTTAAAAGCTGCGAGGTTACATGAAAGTTTAGAATTGCTTAAAGATATGGAAACAAAGGGTTTATTAGATATGACCAAGATTTATCATGCAAAGTTTTTTAACATCTGCAAGAGGAAAAGGGCAGTTAAAGAAGCTTTTGATTACATTAGGCTAATTCCAAATCCAACTTTGAGTACATTTAACATGCTTATGTCAGTGTGTACAAGCTCCCAAGATTCAGAAAGGGCTTTCGAAGTGTTGAAGCTACTGAAAGAGGCTCGACTAGAACCTGATTGCAAACTTTATACCACTCTGATTTCCACTTGTGCTAAGAGTGGAAAAGTTGATACAATGTTTGAAATGTTTCACAAGATGGTTAATTCTGGAGTGGAACCCAATGTTCATACCTATGGGGCACTCATTGATGGTTGTGCTAGAGCTGGGCAAATAGCAAAAGCATTTGGTGCTTATGGAATATTGAGGTCCAAGAATGTGAAGCCAGATCGTGTTGTATTCAATGCACTTATAGCTGCATGTGCTCAGTCAGGAGCGGTGGATCGTGCTTTTGATGTTTTAGCAGAAATGGCAGCTGAAATACAACCCATTGACCCAGATCACATAACTATTGGTGCATTGATGAAGGCTTGTGCAAATGCTGGTCAGGTTGAACGGGCACTAGAAGTGTATAAGATGTTACAAAAATATAATTTAAAGGGAACTCCAGAAGTTTACACGATTGCCATTAATTCTTGCAGCCAAACTGGAGATTGGGAATTTGCATGTAGTGTTTACAATGACATGACCCAGAAAGGGGTTCTCCCTGATGAGATGTTTCTGAGTGCACTGATAGATGTTGCTGGACATGCGAAAAAGCTGGATGCTGCCTTTGATGTCCTCAAAGAAGCTCGTAAAGGAGGAATACATATTGGAATGATGTCATATAGCTCGCTAATGGGTGCCTGTAGCAATGCAAGAAATTGGGAAAAGGCATTGGAGCTATATGAATATCTCAAGGCACATAAATTGGTGCGAACAGTTTCAACAGTTAATGCTTTGCTCACTGCGCTTTGTGATGGAAATCAATTTCAGAGGGCTTTGGAAGTTTTATCTGAAATGAAAGGATTGGGATTGTGCCCAAACAGTATCACATTCTCAGTACTGTTAACAGCAAGCGAGAAAAACGATGATATGGAAGCAGCTCAAATGCTTCTTTCTCAAGCCAAAATGGAGGGTGTTGCCCTTAATGTCAACATGTGTCGATGCATAATTGGAATGTGCCTGCAAAGATATGAGAGGGATTGCTTTGTTGGTGAACCTGTTTTATCTTTCAACTCAGGACGGGCCCAAGTCAATAATAAATGGACATCACTGGCTTTAGCAGTGTATCGTGAAACACTTGGAGCTGGTGAAAAACCTACAAGTGAAATACTGTCACGACTTCTGGGATGCTTACAACTCCCTTATGATGCATCTGTCAAGAATAGACTAGTTGACAACCTGGGAGTAAGCACTGAATCTTCAAGAAACTCAAACCTTCGCGCATTAGTAGATGGTTTTGGGGAATATGATGTTCGTGCTTTTTCAATACTAGAGGAAGCTGCTTCATATGGAGTTGTTTCATCAGTATCATTCAAAGTGAGTCCTATTGTTGTTGATGCTAAGGACATGCATACGTCTACTGCTGAGGTTTATCTCTTAACTGTTCTGAAAGGTCTCAAGCATCGACTGGCAGCAGGTGCAAGATTATCCAATATAATAATTTTACTGCCGGTAGAGAAAACAAAAGTTTCAACTCAAAAGGGGGAAAAGATGATCAACTTGGCTAACAGAGTTGGCCAGGCAGTTGCAGCTTTATTCAGGAGACTTAAGATTCCTTACCAGGGTCACGAATCGAGTGGGAAGCTTAGAATTAATGGTCTAGCTCTGAAGAAATGGTTTCAGCCGAAACTTGCATCATTCAGTGGGAAACCAGGTGACTGGAGCTCATCCCCATCAAGACTGGGCAAACGCATTAGCCATCAGCAGCGAAGGATTCGAACCGGCAATTTATCTTTGGACTAA 3312 0.4176 MELNLCVNYHNRHAFRFTSPSAFSLSTLRSVRTHFLGSAHTLRPPLPPLQSRKKCNRLGLLRLHSPRFVFKASLQSHSLIVVVVLVTLSAVSILRFTLNNRKKSRNQTRGHAKFALSRQGSNVGNQVIESQILGFPEFQRDNPLSEIGNLTDHNAEDNHILEDKESQLPLLKSSLVHEASFMTNISESSTPVLDSSFNNSSSRVLEESILPDAFQSTVLQPLAFAEEMALQVEENQDQVDSDPESPLTIVKSEHTTSSVGINNELTTIDEQTKENIDAISFDVLFGESARQELYMFYEDNKSTVGSMSPLSSLKSLSLHASTNNVKGLPSTMRNTTLKGSDISTEISPQEYIEGVVPISSHTEGYTPQNGSKHSRKGGRALPAKVFPNNGHSINMQFDQKSDQTRVEDDQKNDHSDYLSRYNKLLKAARLHESLELLKDMETKGLLDMTKIYHAKFFNICKRKRAVKEAFDYIRLIPNPTLSTFNMLMSVCTSSQDSERAFEVLKLLKEARLEPDCKLYTTLISTCAKSGKVDTMFEMFHKMVNSGVEPNVHTYGALIDGCARAGQIAKAFGAYGILRSKNVKPDRVVFNALIAACAQSGAVDRAFDVLAEMAAEIQPIDPDHITIGALMKACANAGQVERALEVYKMLQKYNLKGTPEVYTIAINSCSQTGDWEFACSVYNDMTQKGVLPDEMFLSALIDVAGHAKKLDAAFDVLKEARKGGIHIGMMSYSSLMGACSNARNWEKALELYEYLKAHKLVRTVSTVNALLTALCDGNQFQRALEVLSEMKGLGLCPNSITFSVLLTASEKNDDMEAAQMLLSQAKMEGVALNVNMCRCIIGMCLQRYERDCFVGEPVLSFNSGRAQVNNKWTSLALAVYRETLGAGEKPTSEILSRLLGCLQLPYDASVKNRLVDNLGVSTESSRNSNLRALVDGFGEYDVRAFSILEEAASYGVVSSVSFKVSPIVVDAKDMHTSTAEVYLLTVLKGLKHRLAAGARLSNIIILLPVEKTKVSTQKGEKMINLANRVGQAVAALFRRLKIPYQGHESSGKLRINGLALKKWFQPKLASFSGKPGDWSSSPSRLGKRISHQQRRIRTGNLSLD* 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0815 1103 MobiDBLite consensus disorder prediction 360 380 - -
Ahy13g0815 1103 Pfam Pentacotripeptide-repeat region of PRORP 630 804 IPR033443 -
Ahy13g0815 1103 Pfam Pentacotripeptide-repeat region of PRORP 483 621 IPR033443 -
Ahy13g0815 1103 Gene3D Tetratricopeptide repeat domain 617 687 IPR011990 GO:0005515
Ahy13g0815 1103 Gene3D Tetratricopeptide repeat domain 706 930 IPR011990 GO:0005515
Ahy13g0815 1103 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 480 514 IPR002885 -
Ahy13g0815 1103 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 657 691 IPR002885 -
Ahy13g0815 1103 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 585 615 IPR002885 -
Ahy13g0815 1103 MobiDBLite consensus disorder prediction 1070 1091 - -
Ahy13g0815 1103 Coils Coil 807 827 - -
Ahy13g0815 1103 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 727 761 IPR002885 -
Ahy13g0815 1103 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 550 584 IPR002885 -
Ahy13g0815 1103 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MRL1, CHLOROPLASTIC 72 1103 - -
Ahy13g0815 1103 TIGRFAM PPR: pentatricopeptide repeat domain 765 797 IPR002885 -
Ahy13g0815 1103 TIGRFAM PPR: pentatricopeptide repeat domain 552 585 IPR002885 -
Ahy13g0815 1103 TIGRFAM PPR: pentatricopeptide repeat domain 625 655 IPR002885 -
Ahy13g0815 1103 TIGRFAM PPR: pentatricopeptide repeat domain 518 551 IPR002885 -
Ahy13g0815 1103 TIGRFAM PPR: pentatricopeptide repeat domain 483 516 IPR002885 -
Ahy13g0815 1103 TIGRFAM PPR: pentatricopeptide repeat domain 730 761 IPR002885 -
Ahy13g0815 1103 TIGRFAM PPR: pentatricopeptide repeat domain 660 693 IPR002885 -
Ahy13g0815 1103 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 762 796 IPR002885 -
Ahy13g0815 1103 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 622 656 IPR002885 -
Ahy13g0815 1103 Gene3D Tetratricopeptide repeat domain 454 616 IPR011990 GO:0005515
Ahy13g0815 1103 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 515 549 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0815 Ahy-Chr13 8565682 8575089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0815 428 846 Glycosyltransferase AT1G05670 24.356 4.53e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0815 - - gmx:100814164 1528.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0815 13 8565682 8575089 Ahy13g0815 13 8565682 8575089 ECH