Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0759 ATGGATGCTATTAGAAAGCAAGCTTCGAAGCTTCGAGAACAAGTAGCTCGCCAACAACAGGCTGTTCTGAAACAGTGGTATGGCGGTTCAGATAATTTGGTCGCTGATGAGGCAGAACTCCAGCTACATCAGAGACTTGAGAAGCTTTATATATCGACACGTGCGGGGAAGCACTATCAAAGAGATATTGTACGTGGTGTAGAAGGTTATATTGTTACCGGATCAAAGCAAGTTGAAATCGGGGCAAAGCTATCAGAAGATAGTAGGAAATATGGTGCAGAAAATACATGTACGAGTGGCAACACATTATCTAGAGCTGCACTAAATTTCGCAAGAGCCCGAGCTCAAATGGAGAAGGAACATGGAAACTTACTGAAAGCTTTTGGAACACAGGTTGCAGAGCCCTTAAGAGCAATGGTGGTGGGAGCTCCATTGGAGGATGCCCGGCATCTAGCTCAACGCTATGACAGAATGCGACAGGAAGCTGAAGCCCAGGCTATTGAAGTTTCTAAGCGCCAGGCAAAAGTAAGAGAAACGCCAGGCAATGCTGACAATGCCATGAAATTTGAAGCAGCTGAAGCAAAACTGCATGACCTGAAAACAAACATGGGAATATTGGGGAAGGAAGCTGCTGCTGCATTGGCTGCTGTTGAAGCACAGCAACAGAGGTTAACACTTCAGCGACTTATAGCTATGGTTGAAGCAGAGCGTGCATATCATCAAATAGTGCTACAAATTCTTGATCAGCTTGAGGGTGAGATGATATCTGAACGTCATCGAATTGAAGCTGCTCCTGCTCCTGCTCCTAGTGTGGATGAGAGTATGCCACCACCACCGTCATATGAGGAAGCTAATGGTGTCTATGCTTCTCAGGCAAGTAATGGATCAACTGATAGCATGGGTTACTTCTTAGGCGAGGTTTTGTTTCCGTACTCTGCTGTGTCTGAAGTGGAGTTGAATCTTTCAGTTGGTGATTATGTTGTTGTCCGAAAGGTAACAAATAATGGGTGGGCCGAGGGTGAATGCAAAGGAAAAGCAGGTTGGTTTCCATTTAGTTACATTGAAAGAAGGGAACGGGTTCTTGCTAGCAAGGTGGCTGAAGTGTTTTGA 1110 0.4532 MDAIRKQASKLREQVARQQQAVLKQWYGGSDNLVADEAELQLHQRLEKLYISTRAGKHYQRDIVRGVEGYIVTGSKQVEIGAKLSEDSRKYGAENTCTSGNTLSRAALNFARARAQMEKEHGNLLKAFGTQVAEPLRAMVVGAPLEDARHLAQRYDRMRQEAEAQAIEVSKRQAKVRETPGNADNAMKFEAAEAKLHDLKTNMGILGKEAAAALAAVEAQQQRLTLQRLIAMVEAERAYHQIVLQILDQLEGEMISERHRIEAAPAPAPSVDESMPPPPSYEEANGVYASQASNGSTDSMGYFLGEVLFPYSAVSEVELNLSVGDYVVVRKVTNNGWAEGECKGKAGWFPFSYIERRERVLASKVAEVF* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0759 369 Coils Coil 145 172 - -
Ahy13g0759 369 Gene3D Arfaptin homology (AH) domain/BAR domain 40 264 IPR027267 -
Ahy13g0759 369 PANTHER PROTEIN, PUTATIVE-RELATED 1 369 - -
Ahy13g0759 369 SUPERFAMILY SH3-domain 278 357 IPR036028 GO:0005515
Ahy13g0759 369 Coils Coil 216 236 - -
Ahy13g0759 369 PANTHER SH3 DOMAIN-CONTAINING 1 369 - -
Ahy13g0759 369 Coils Coil 1 21 - -
Ahy13g0759 369 SUPERFAMILY BAR/IMD domain-like 41 254 IPR027267 -
Ahy13g0759 369 SMART SH3_2 303 358 IPR001452 GO:0005515
Ahy13g0759 369 Pfam Variant SH3 domain 307 355 IPR001452 GO:0005515
Ahy13g0759 369 Gene3D SH3 Domains 290 367 - -
Ahy13g0759 369 ProSiteProfiles Src homology 3 (SH3) domain profile. 300 359 IPR001452 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0759 Ahy-Chr13 7950548 7954016 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0759 - - gmx:100783004 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0759 13 7950548 7954016 Ahy13g0759 13 7950548 7954016 ECH