Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0745 ATGCATTGCTTCTTCACTTCCTCACACTTTATTTTCAGTATGGAACGAACAACACTCTTTCTCTTCTCTCTCTTCGCTCTCCTCTTTTTGTTTCTCTCTCCGATATCGTCGGAGGAGGACGGTGGTGCTGACGACGCCTTAATCCGCCAGGTGGTTGGTGACGGCGACGGCGACGGCGACGCGCATTTGTTGGGAGCGGAGCATCACTTCGCCGCCTTCAAGCGGAGATTCGGGAAGGTGTATTCTACGCTGGAGGAGCACGATTACAGGTTCGCGGTGTTCAAGGCTAACATGCACCGCGCGAGAAGACACCAGAGGATGGACCCCTCGGCGGTTCACGGCGTCACGCGGTTCTCTGACATGACGGAATCTGAGTTCAGGAAGAACGTTTTGGGGCTGAGAGGGGTTAGGTTGCCATCTGATGCAAACAAAGCTCCTATTCTGCCAACAGCAGATCTTCCCTCCGATTTTGATTGGAGAGATCATGGAGCTGTTACCCCTGTCAAAAATCAGGGTTCTTGTGGATCGTGTTGGAGTTTCAGCGCAACTGGGGCACTGGAAGGTGCTCATTATCTAGCTACCGGGGAACTTGTTAGTCTCAGTGAACAGCAGCTAGTTGATTGCGATCATGAGTGCGACCCAGATCAACCAGGTTCTTGTGACAAAGGGTGCAATGGTGGATTGATGAACAGCGCTTTTGAATACATCCTTAAATCCGGTGGGATCATGAGAGAGGAAGACTATCCTTATAAGGGTAGTGATCGTGGAACCTGCAAATTCAACAAGACAAAGATAGCAGCATCAGTAGCAAACTTCAGTGTAGTTTCACTTGATGAAGACCAGATTGCTGCCAATCTTGTTAAAAATGGCCCTCTTGCAGTGGCTATAAATGCTGTATTTATGCAGACATATATTGGAGGGGTTTCATGCCCATACATATGTTCAAAGAGGTTGGATCATGGGGTGTTACTGGTGGGATATGGCTCTGGAGGCTATTCTCTGATTCGGATGAAGGAGAAACCATATTGGATCATCAAGAATTCATGGGGAGAAAATTGGGGAGAAAATGGATACTACAAGATTTGCCGTGGACGGAATATCTGTGGGGTGGACTCCTTGGTTTCAACTGTGGCAGCTGTTCATACCACTGCTCATTAG 1158 0.4853 MHCFFTSSHFIFSMERTTLFLFSLFALLFLFLSPISSEEDGGADDALIRQVVGDGDGDGDAHLLGAEHHFAAFKRRFGKVYSTLEEHDYRFAVFKANMHRARRHQRMDPSAVHGVTRFSDMTESEFRKNVLGLRGVRLPSDANKAPILPTADLPSDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGAHYLATGELVSLSEQQLVDCDHECDPDQPGSCDKGCNGGLMNSAFEYILKSGGIMREEDYPYKGSDRGTCKFNKTKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSKRLDHGVLLVGYGSGGYSLIRMKEKPYWIIKNSWGENWGENGYYKICRGRNICGVDSLVSTVAAVHTTAH* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0745 385 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 342 361 IPR025661 -
Ahy13g0745 385 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 43 379 - -
Ahy13g0745 385 PANTHER CYSTEINE PROTEASE RD19C-RELATED 43 379 - -
Ahy13g0745 385 SMART Inhibitor_I29_2 70 126 IPR013201 -
Ahy13g0745 385 SUPERFAMILY Cysteine proteinases 68 377 IPR038765 -
Ahy13g0745 385 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 318 328 IPR025660 -
Ahy13g0745 385 Pfam Cathepsin propeptide inhibitor domain (I29) 70 126 IPR013201 -
Ahy13g0745 385 CDD Peptidase_C1A 154 377 IPR039417 -
Ahy13g0745 385 PRINTS Papain cysteine protease (C1) family signature 320 330 IPR000668 GO:0006508|GO:0008234
Ahy13g0745 385 PRINTS Papain cysteine protease (C1) family signature 171 186 IPR000668 GO:0006508|GO:0008234
Ahy13g0745 385 PRINTS Papain cysteine protease (C1) family signature 342 348 IPR000668 GO:0006508|GO:0008234
Ahy13g0745 385 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 171 182 IPR000169 -
Ahy13g0745 385 Pfam Papain family cysteine protease 153 376 IPR000668 GO:0006508|GO:0008234
Ahy13g0745 385 Gene3D Cysteine proteinases 58 378 - -
Ahy13g0745 385 SMART pept_c1 153 378 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0745 Ahy-Chr13 7811572 7813547 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0745 K01373 - gmx:100812198 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0745 13 7811572 7813547 Ahy13g0745 13 7811572 7813547 ECH