Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy13g0736 | ATGGCTAGTATCCCCAATGGCAATGGCAACGGCAACGGCAACAGTAATGTCGGTCTACAGCCTGATCTGCCGCGGAGGACTTACCAAGCAGTAGTGGCTGCGACTCGAGATATGGGAATTTCCAAGGATGGGAAAATGCCCTGGAACTTGCCTTCTGATCTCAAGTTCTTTCAGGAGATCACAACAACAACATCTGATTCTGGGAAGAAGAATGCTGTTGTGATGGGTAGAAAAACATGGGAGAGTATCCCTCCCGAGAAGAGGCCCCTTTCTGGTCGACTTAATGTTGTTCTGACTCGCTCTGGTAGTTTCGATATAGCTACAGCAGAGAATGTTGTTATATGTGGAAGTCTGTCTTCTGCTATGGAACTGTTGGCTGCATCTCCTTACTGTCTTTCAATTGAGAAAGTATTTCTTACAGGAGGTGGAGAGATATTTAGGGAGGCTCTTAATGCACCTGGATGTGAGGCTGTGCATATTACAGAAATTGAAGAACGCATTGAGTGCGACACTTTTATCCCTCAAATTGATACCTCCATGTTTCAGCCATGGTACTCATATTTTCCTTTGGTGGAAGACAACATTCGCTATTCTTTCACCACTTTTGTACGTGTGAGAAACTCTGCATTGGAGTCCCTGAGTCAGAATACTCATTCAGATTTTGATAATAGTTCAGACTCTAGAAAGTTTGAAGTTCAGAAATTTTCTTTTCTTCCTAAAATGATTTTTGAGAGACATGAAGAGTACAAGTACCTTAGACTGGTTCAAGAAATCATTTCTGAAGGTACAACTAAGGATGATAGGACAGGGACTGGTACCTTGTCCAAATTTGGTTGCCAGATGAGGTTCAATCTGCGCAGAAGCTTTCCTCTTCTGACAACTAAGAGAGTATTTTGGCGTGGGGTTGTTGAAGAGCTTCTTTGGTTTATCAGTGGTTCAACAAGTGCTAAGGTTCTGCAAGATAAAGGCATTCATATATGGGATGGCAATGCTTCCAGAGAATACCTTGATAGCATTAGTTTGACAGACAGGGAGGAGGGTGACTTAGGACCTGTTTATGGGTTTCAGTGGAGGCACTTTGGTGCCAGGTATACAGACATGCATGCTGATTACTCTGGTCAAGGATTTGATCAGCTTTTAGATGTTATTAACAAGATAAAGCATAATCCTGATGATCGACGGATCATTCTCTCAGCGTGGAATCCAGCTGATCTTAAATTGATGGCTCTTCCACCCTGCCACATGTTTGCGCAGTTTTATGTAGCAAATGGGGAGCTCTCGTGTCAAATGTACCAGCGATCTGCTGATATGGGCCTGGGTGTGCCATTTAATATTGCATCTTATGCACTCTTGACATGCATGATTGCTCATGTTTGTGATCTTGTACCAGGTGATTTTATCCATGTTATTGGGGATGCACATGTTTACCGCAATCATGTGAGACCTTTGCAGGAACAGCTCCAAAACCATCCTAAACCTTTTCCGATTTTGAAGATAAACCCAAAGAAGAAGGATATAGATTCTTTTGTGGCAGCTGATTTCAATCTCATAGGCTATGATCCTCACCAAAAAATTGAAATGAAGATGGCTGTTTAG | 1596 | 0.4254 | MASIPNGNGNGNGNSNVGLQPDLPRRTYQAVVAATRDMGISKDGKMPWNLPSDLKFFQEITTTTSDSGKKNAVVMGRKTWESIPPEKRPLSGRLNVVLTRSGSFDIATAENVVICGSLSSAMELLAASPYCLSIEKVFLTGGGEIFREALNAPGCEAVHITEIEERIECDTFIPQIDTSMFQPWYSYFPLVEDNIRYSFTTFVRVRNSALESLSQNTHSDFDNSSDSRKFEVQKFSFLPKMIFERHEEYKYLRLVQEIISEGTTKDDRTGTGTLSKFGCQMRFNLRRSFPLLTTKRVFWRGVVEELLWFISGSTSAKVLQDKGIHIWDGNASREYLDSISLTDREEGDLGPVYGFQWRHFGARYTDMHADYSGQGFDQLLDVINKIKHNPDDRRIILSAWNPADLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDAHVYRNHVRPLQEQLQNHPKPFPILKINPKKKDIDSFVAADFNLIGYDPHQKIEMKMAV* | 532 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy13g0736 | 531 | ProSitePatterns | Thymidylate synthase active site. | 393 | 421 | IPR020940 | GO:0004799|GO:0006231 | |
| Ahy13g0736 | 531 | PANTHER | THYMIDYLATE SYNTHASE 1 | 8 | 531 | IPR045097 | GO:0016741 | |
| Ahy13g0736 | 531 | Gene3D | Dihydrofolate Reductase, subunit A | 16 | 205 | IPR024072 | - | |
| Ahy13g0736 | 531 | Gene3D | Thymidylate synthase/dCMP hydroxymethylase domain | 240 | 531 | IPR036926 | - | |
| Ahy13g0736 | 531 | Pfam | Dihydrofolate reductase | 29 | 203 | IPR001796 | GO:0004146|GO:0046654 | |
| Ahy13g0736 | 531 | PIRSF | DHFR-TS | 14 | 531 | IPR012262 | GO:0004146|GO:0004799|GO:0006730 | |
| Ahy13g0736 | 531 | SUPERFAMILY | Dihydrofolate reductase-like | 24 | 205 | IPR024072 | - | |
| Ahy13g0736 | 531 | Hamap | Thymidylate synthase [thyA]. | 248 | 531 | IPR000398 | GO:0004799|GO:0006231 | |
| Ahy13g0736 | 531 | CDD | DHFR | 30 | 203 | IPR001796 | GO:0004146|GO:0046654 | |
| Ahy13g0736 | 531 | ProSiteProfiles | Dihydrofolate reductase (DHFR) domain profile. | 27 | 204 | IPR001796 | GO:0004146|GO:0046654 | |
| Ahy13g0736 | 531 | CDD | TS_Pyrimidine_HMase | 251 | 484 | IPR023451 | - | |
| Ahy13g0736 | 531 | PANTHER | BIFUNCTIONAL DIHYDROFOLATE REDUCTASE-THYMIDYLATE SYNTHASE | 8 | 531 | - | - | |
| Ahy13g0736 | 531 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Ahy13g0736 | 531 | SUPERFAMILY | Thymidylate synthase/dCMP hydroxymethylase | 200 | 531 | IPR036926 | - | |
| Ahy13g0736 | 531 | Pfam | Thymidylate synthase | 250 | 531 | IPR023451 | - | |
| Ahy13g0736 | 531 | PRINTS | Thymidylate synthase family signature | 464 | 481 | IPR000398 | GO:0004799|GO:0006231 | |
| Ahy13g0736 | 531 | PRINTS | Thymidylate synthase family signature | 289 | 310 | IPR000398 | GO:0004799|GO:0006231 | |
| Ahy13g0736 | 531 | PRINTS | Thymidylate synthase family signature | 382 | 401 | IPR000398 | GO:0004799|GO:0006231 | |
| Ahy13g0736 | 531 | PRINTS | Thymidylate synthase family signature | 426 | 452 | IPR000398 | GO:0004799|GO:0006231 | |
| Ahy13g0736 | 531 | PRINTS | Thymidylate synthase family signature | 408 | 423 | IPR000398 | GO:0004799|GO:0006231 | |
| Ahy13g0736 | 531 | TIGRFAM | thym_sym: thymidylate synthase | 250 | 531 | IPR000398 | GO:0004799|GO:0006231 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy13g0736 | Ahy-Chr13 | 7660060 | 7664764 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy13g0736 | K13998 | - | gmx:100786311 | 941.028 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy13g0736 | 13 | 7660060 | 7664764 | Ahy13g0736 | 13 | 7660060 | 7664764 | ECH |