LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy13g0716	ATGGAATCTGCATGTATGGCAATGAAAACCAATCCTCATTGCCTTCATCAAGAAAATGGATTCTTAGGTGAAAGGATCAAAGGGGGTGTCAACTACAGTCCCTGGATCATCAAAGAGAAGAAGAAGAAGATGATCAATAAGGCCAAACCTTCTGTTGTATCTTCTGTTCTTACATCAGAAACTGCAAAAGAATCTTTGACAATTCAAATGCCATCTTTTCTGAGAAGAAAAGCTGATCCAAAAAATGTAGTCTCAATCATATTGGGGGGTGGTCCTGGTGCTCAACTTTATCCACTCACAAAAAGAACAGCCACACCTGCTGTTCCTGTTGGTGGTTGCTACAGGCTTATAGACATACCAATGAGCAATTGCATCAACAGTGGCATCAACAAGATATTTGTGTTAACACAGTTCAACTCTGCATCCCTCAACCGGCACATAGCTCGCACCTACTTTGGAAATGGCATCAACTTTGGAGATGGATATGTTGAGGTTCTGGCAGCTACTCAAACAGCTGGTGAAGCTGGAAATAAGTGGTTCCAAGGAACAGCAGATGCTGTGAGGCAATTCACTTGGGTGTTCGAGGATGCTAAGCACACAAATGTTGAGAATGTTTTGATCTTGGCTGGTGATCATTTATACAGAATGGATTACATGGACCTTGTGCAGAGTCATGTAGATAGAAATGCAGATATCACAGTTTCATGTGCTGCTGTAGGAGACAGCCGCGCATCGGATTACGGGTTGGTCAAGGTTGATGGCAGAGGTAGGATCATCCATTTTTCAGAGAAACCAAAGGGTGCTGATCTGAAATCAATGCAAGTAGATACTTCTATTATGGGGTTGTCACACCAAGATGCAAAGAAATCACCATATATTGCCTCTATGGGGGTTTATGTATTCAAGACAGAGGTTTTACTCAAGCTTCTCAAATGGAGATATCCAACATCCAATGACTTTGGATCCGAAATCATTCCTGCAGCTGTCGGGGAGCACGATGTTCAAGCATATTTTTTTGGAGACTATTGGGAAGACATTGGAACAATCAAATCCTTTTATGATGCTAACATGGCTCTTACTGAAGAGAATCCAATGTTCAAATTCTATGACCCCAAGACACCTATTTACACATCTCCAAGATTCCTACCACCAACTAAGATTGATAAATGCCGGATTGTGGATGCAATCATCTCCCATGGATGTTTCCTGAGAGAATGTACTGTCCAACATTCCATTGTGGGCGAGCGATCGCGTTTGGATTATGGAGTTGAACTCCTGGACACTGTAATGATGGGAGCAGACTATTACCAAACGGAATCTGAAATAGCCGCGCTTTTGGCCGAAGGGAAGGTTCCCATTGGGATTGGAAAGAACACCAAGATTAGGAACTGCATAATTGACAAGAATGCAAGGATTGGGAAAGATGTGATCATCATGAACAAAGATGGTGTTGAAGAAGCAGATAGATCAGAAGATGGATTCTACATAAGGTCAGGAATCACCATCATAATGGAGAAGGCAACAATAGAGGATAGAACTGTCATATAA	1548	0.4199	MESACMAMKTNPHCLHQENGFLGERIKGGVNYSPWIIKEKKKKMINKAKPSVVSSVLTSETAKESLTIQMPSFLRRKADPKNVVSIILGGGPGAQLYPLTKRTATPAVPVGGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGINFGDGYVEVLAATQTAGEAGNKWFQGTADAVRQFTWVFEDAKHTNVENVLILAGDHLYRMDYMDLVQSHVDRNADITVSCAAVGDSRASDYGLVKVDGRGRIIHFSEKPKGADLKSMQVDTSIMGLSHQDAKKSPYIASMGVYVFKTEVLLKLLKWRYPTSNDFGSEIIPAAVGEHDVQAYFFGDYWEDIGTIKSFYDANMALTEENPMFKFYDPKTPIYTSPRFLPPTKIDKCRIVDAIISHGCFLRECTVQHSIVGERSRLDYGVELLDTVMMGADYYQTESEIAALLAEGKVPIGIGKNTKIRNCIIDKNARIGKDVIIMNKDGVEEADRSEDGFYIRSGITIIMEKATIEDRTVI*	516

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy13g0716	515	Gene3D	Hexapeptide repeat proteins	381	515	-	-
	Ahy13g0716	515	TIGRFAM	glgC: glucose-1-phosphate adenylyltransferase	83	479	IPR011831	GO:0005978\|GO:0008878
	Ahy13g0716	515	ProSitePatterns	ADP-glucose pyrophosphorylase signature 2.	179	187	IPR005836	GO:0005978\|GO:0008878
	Ahy13g0716	515	Pfam	Nucleotidyl transferase	85	361	IPR005835	GO:0009058\|GO:0016779
	Ahy13g0716	515	ProSitePatterns	ADP-glucose pyrophosphorylase signature 1.	89	108	IPR005836	GO:0005978\|GO:0008878
	Ahy13g0716	515	ProSitePatterns	ADP-glucose pyrophosphorylase signature 3.	294	304	IPR005836	GO:0005978\|GO:0008878
	Ahy13g0716	515	SUPERFAMILY	Trimeric LpxA-like enzymes	377	515	IPR011004	-
	Ahy13g0716	515	PANTHER	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE	1	515	-	-
	Ahy13g0716	515	SUPERFAMILY	Nucleotide-diphospho-sugar transferases	81	476	IPR029044	-
	Ahy13g0716	515	Gene3D	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	69	380	IPR029044	-
	Ahy13g0716	515	PANTHER	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED	1	515	IPR011831	GO:0005978\|GO:0008878
	Ahy13g0716	515	CDD	ADP_Glucose_PP	86	346	-	-
	Ahy13g0716	515	CDD	LbH_G1P_AT_C	383	509	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy13g0716	Ahy-Chr13	7444423	7448233	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy13g0716	K00975		-	gmx:100808791	906.746

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy13g0716	13	7444423	7448233	Ahy13g0716	13	7444423	7448233	ECH