Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0665 ATGAAGACACTCAGTCCCTTAAACTCCTCGAATCCATGTCTCCTCAAGACCCATTTCCTCAAAGTTCCCATCTTTAACCCCATTTTCAAGTTCAAGCCATTGCCACACAACACCCACCATGCAAGGATAGCCAAAGTTCCCTCATTTACCATAAACTCTAAGCTAAAAAGCTCTCAGGATATCAATAACAAAGGGAAGAAGAGCGTTTCCCAGAAGATTGTGCTATCAGAAACTTCGCCTCCTCCACTTGCAGTTGATAAAGATGACATCAATGGTGGCAGTGGCAATGAGAGTGTCCCAGTTAGCTCAAAGAAAAAAGGAGGGGTTTCTGGGTTGGCCAAGAAGTTGAGCAAAAAGGTGTTGCAGATTCTCTCTAATTTGTCTTTGGCTATTGGAGAAATGTTCACCATTGCAGCTTTAATGGCTTTAGGAACTGTTATTGAACAAGGTGAGGCCCCTGATTTTTACTTCAAAAATTACCCTGAAGATCATCCTGTGTTGGGTTTTTTTACTTGGAGATGGGTTCTCACCCTTGGCTTTGATCACATGTTTACATCCCCTGTATTCATTGGAATGTTGGCTCTCCTTGGTGCATCTCTGATGGCCTGCACTTACACGACACAGATTCCGCTCGTCAAGGTTTCGAGAAGATGGGCATTTTTGCATTCTGCTGAGACTATTCGTAAGCAAGAATTTTCAGATACGTTGACAAGAGCATCAATTGAAGATGTTGGTACTCTATTAATGGGAGCTGGATATGAGGTATTCTTGAAAGGACCATGTTTATATGCTTTTCAAGGGCTTGCCGGTCGGCTGGCCCCTATAGGAGTCCATATATCACTGCTGCTGATAATGGTTGGAGGAACTCTAAGTGCTGCTGGGAGCTTCAAAGGTTCAGTCACGGTGCCGCAAGGGCTGAATTTTGTTGTAGGAGATGTTCTTGGTCCTACTGGTTTTCTGTCCACTCCCACTGAAGCTTTTAATACAGAGATTCATGTCAACAGATTTTACATGGATTATTTTGAAAGTGGAGAGGTTTCGCAGTTCCACACTGATCTTTCCCTCCTTGACATGGATGGGAAAGAAGTAATGAGAAAAACAATTAGTGTAAATGATCCTTTAAGATATGGTGGCATCACTATATATCAGACAGATTGGAGTATTTCAGCACTTCAAATTCTTAAGGACAATGAAGGACCTTATAACTTGGCTATGGCCCCTCTACAGATCAATGGGGACAAGAAACTTTTTGGAACTTTCCTACCTGTTGGAGATATCAACTCTCCTGATGTTAAGGGAATATCTATGCTTGCGCGTGATCTGCAGTCAATTGTCCTTTATGATAAGGAAGGGAAATTTGCAGGAGTTAGAAGGCCTAATTCAAAGCTCCCAATCAATATTGATGGCTCAGAAATTGTGATTCTTGATGCAATAGGGAGCAGTGGCTTGGACTTGAAGACTGACCCGGGAGTTCCAACTGTTTATGCTGGATTTGGTGCTCTCATGCTCACTACTTGCATTAGCTACTTATCTCATTCACAGATATGGGCCATACAAGATGGAACAAGTGTGATTATTGGAGGGAAGACTAATAGAGCAAAGATGGAGTTCCCTGAAGAGATGAACCGTTTGCTTGATAAGGTTCCTGAAATAGTTGAATCTTCTTCATCTCAGCAAGTTGACACCATTACTAGTGGCTAG 1701 0.4239 MKTLSPLNSSNPCLLKTHFLKVPIFNPIFKFKPLPHNTHHARIAKVPSFTINSKLKSSQDINNKGKKSVSQKIVLSETSPPPLAVDKDDINGGSGNESVPVSSKKKGGVSGLAKKLSKKVLQILSNLSLAIGEMFTIAALMALGTVIEQGEAPDFYFKNYPEDHPVLGFFTWRWVLTLGFDHMFTSPVFIGMLALLGASLMACTYTTQIPLVKVSRRWAFLHSAETIRKQEFSDTLTRASIEDVGTLLMGAGYEVFLKGPCLYAFQGLAGRLAPIGVHISLLLIMVGGTLSAAGSFKGSVTVPQGLNFVVGDVLGPTGFLSTPTEAFNTEIHVNRFYMDYFESGEVSQFHTDLSLLDMDGKEVMRKTISVNDPLRYGGITIYQTDWSISALQILKDNEGPYNLAMAPLQINGDKKLFGTFLPVGDINSPDVKGISMLARDLQSIVLYDKEGKFAGVRRPNSKLPINIDGSEIVILDAIGSSGLDLKTDPGVPTVYAGFGALMLTTCISYLSHSQIWAIQDGTSVIIGGKTNRAKMEFPEEMNRLLDKVPEIVESSSSQQVDTITSG* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0665 566 MobiDBLite consensus disorder prediction 79 108 - -
Ahy13g0665 566 Hamap Cytochrome c biogenesis protein Ccs1 [ccs1]. 117 546 IPR023494 -
Ahy13g0665 566 Pfam ResB-like family 430 541 IPR007816 -
Ahy13g0665 566 Pfam ResB-like family 128 393 IPR007816 -
Ahy13g0665 566 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 80 556 IPR023494 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0665 Ahy-Chr13 6868065 6872773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0665 11 557 Miscellaneous Gene Families AT1G49380 66.849 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0665 K07399 - gmx:100807003 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0665 13 6868065 6872773 Ahy13g0665 13 6868065 6872773 ECH