Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0649 ATGGATGAATTACCTGGCTCTGTGGGCACCAGTGCCAGCTTCAGCCTCAGATTGGGCCAGGCTATTTTCTCATCTTCTTCACTCCTCTTTATGTCTTTGGGAGTTGAATTCTACAGCTACACAGCTTTCTGCTATTTGGTAACAATTATGGGATTGGTGATACCTTGGAGCTTCACATTAGCATTGGTTGATGGATATTCAGTTCTTGTCAAATGCCCTATTCGTCAACCAGGAATTCTCATGATTATTGTTGTTGGAGATTGGATATTATCAACACTGACATTAGCAGCAGCTTGCTCAACAGCTAGTGTTGTGGATCTCTTGCTCCATTCCCATGGCAATTTTTGTCCTCCAAAGCTTTGCAGCAGGTACAGGATATCTGCAATCATGGCCTTCTTCTCATGGTTTCTGTCTTTGGCATCCTCTCTTTTCAATCTTTGGCTATTACCCTCTTTGTAA 459 0.427 MDELPGSVGTSASFSLRLGQAIFSSSSLLFMSLGVEFYSYTAFCYLVTIMGLVIPWSFTLALVDGYSVLVKCPIRQPGILMIIVVGDWILSTLTLAAACSTASVVDLLLHSHGNFCPPKLCSRYRISAIMAFFSWFLSLASSLFNLWLLPSL* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0649 152 Pfam Casparian strip membrane protein domain 9 137 IPR006702 -
Ahy13g0649 152 PANTHER CASP-LIKE PROTEIN 5B3 1 151 IPR045009 -
Ahy13g0649 152 PANTHER CASP-LIKE PROTEIN 5C3 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0649 Ahy-Chr13 6746338 6748667 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0649 - - gmx:100810360 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0649 13 6746338 6748667 Ahy13g0649 13 6746338 6748667 ECH