Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0645 ATGTGGAAGGGATCAATGGCTTTTCAAGATGAAGCAGCAGCAAAATTGCTTAGCTCTGATCTCAATGAGCTGAGTTTGGCTGCTCACAAGCTTGCTGATCATGCCATCAAGCTTGGTGGTTTAGGCTTTGGAGCTTCCTTTTTTGGATTGATTGCTGCCATTGCTGCTATTTACTTGTTGATTTTGGACCGTACAAATTGGAAGACAAACATTCTTACAGCACTACTCATTCCATATATTTTTTTCAGCCTGCCTTCAATTATTTTTGGTGTATTCAGGGGAGAAATTGGAAAATGGATTGCCATTATTGCTGTTGTTCTAAGGCTTTTCCTTCCAAAACACTTCCCTGATTGGTTGGAACTGCCTGCTGCATTGATTCTTCTTGTTGTTGTTGCACCATCTCTAATTGCAACCACTTTCAGAAACAACATTGTTGGTGTGGTAGTATGCCTAATCATAGCATGTTATTTGCTGCAAGAACACATTAGAGCCTCTGGTGGATTCAGAAACTCTTTCACCAAAGCCCATGGCATATCCAATTCTGTTGGCATAATCCTTCTCTTGGTTTATCCCATTTGGGCCCTGGTGGTTATCCTCTTTTAG 603 0.4113 MWKGSMAFQDEAAAKLLSSDLNELSLAAHKLADHAIKLGGLGFGASFFGLIAAIAAIYLLILDRTNWKTNILTALLIPYIFFSLPSIIFGVFRGEIGKWIAIIAVVLRLFLPKHFPDWLELPAALILLVVVAPSLIATTFRNNIVGVVVCLIIACYLLQEHIRASGGFRNSFTKAHGISNSVGIILLLVYPIWALVVILF* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0645 200 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 9 199 IPR008892 GO:0016021
Ahy13g0645 200 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED 9 199 - -
Ahy13g0645 200 Pfam Cold acclimation protein WCOR413 8 187 IPR008892 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0645 Ahy-Chr13 6728219 6729782 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0645 - - gmx:100811430 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0645 13 6728219 6729782 Ahy13g0645 13 6728219 6729782 ECH