Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0630 ATGAGGATGGAGAAAAGGTTGTTGCTAAAGATGTGTGTTATGGGAATATGGGTAATGATGGGCATGGTGAAAAGTGATGGTTCTGTTGGTGACATAGTGACACAGGAATTCTTCAATGGTATTATTGATGAAGCTGATGATAGCTGTGCTGGGAAGAAGTTCTACTCCAGAGATGCATTCCTCAGTGCCCTCAATTCCTATGATCAGTTTGGTAATCTTGATACTCTTGATGACTCCAAGCGTGAGATTGCTGCTGCTTTTGCTCATTTCACCCACGAAACTGGACATTTTTGCTACATAGAAGAGATAGATGGTGCATCAAGGGACTATTGTGATGAAACAAACACAGAATATCCATGCAACCCAAACAAAGGGTATTATGGGCGTGGCCCAATTCAAATATCATGGAACTTCAACTATGGGCCTGCAGGGAAGAACATTGGGTTTGATGGGCTCAATGCACCTGAGACTGTGGCCAATGACCCTGTTGTGGCCTTCAAGACTGGACTTTGGTATTGGATGGAGAATGTGAGACCTGTGGTTAGCCAAGGCTTTGGTGCAACCATTAGAGCCATCAATGGTCAACTTGAGTGTGATGGTGCTAACCCTACCACTGTTCAGGCTAGGGTTAATTATTACAAACAATATTGTTCACAATTAGGTGTTGACCCTGGTGATAATCTTACTTGCTAG 693 0.4329 MRMEKRLLLKMCVMGIWVMMGMVKSDGSVGDIVTQEFFNGIIDEADDSCAGKKFYSRDAFLSALNSYDQFGNLDTLDDSKREIAAAFAHFTHETGHFCYIEEIDGASRDYCDETNTEYPCNPNKGYYGRGPIQISWNFNYGPAGKNIGFDGLNAPETVANDPVVAFKTGLWYWMENVRPVVSQGFGATIRAINGQLECDGANPTTVQARVNYYKQYCSQLGVDPGDNLTC* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0630 230 SUPERFAMILY Lysozyme-like 28 230 IPR023346 -
Ahy13g0630 230 CDD chitinase_GH19 33 230 - -
Ahy13g0630 230 Gene3D - 28 230 - -
Ahy13g0630 230 Pfam Chitinase class I 32 179 IPR000726 GO:0004568|GO:0006032|GO:0016998
Ahy13g0630 230 Pfam Chitinase class I 183 230 IPR000726 GO:0004568|GO:0006032|GO:0016998
Ahy13g0630 230 PANTHER CHITINASE-RELATED 18 230 - -
Ahy13g0630 230 PANTHER ENDOCHITINASE EP3-LIKE 18 230 - -
Ahy13g0630 230 ProSitePatterns Chitinases family 19 signature 1. 49 71 IPR000726 GO:0004568|GO:0006032|GO:0016998
Ahy13g0630 230 ProSitePatterns Chitinases family 19 signature 2. 164 174 IPR000726 GO:0004568|GO:0006032|GO:0016998
Ahy13g0630 230 Gene3D Endochitinase, domain 2 101 158 - -
Ahy13g0630 230 PIRSF Endochitinase 5 230 IPR016283 GO:0004568|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0630 Ahy-Chr13 6587081 6589290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0630 28 230 Glycoside Hydrolase AT3G54420 77.833 1.10e-121 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0630 K01183 - gmx:100527091 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0281 18 2330360 2331768 Ahy13g0630 13 6587081 6589290 PCT
Ahy8g1070 8 25723380 25724647 Ahy13g0630 13 6587081 6589290 PCT
Ahy13g0630 13 6587081 6589290 Ahy18g0281 18 2330360 2331768 PCT
Ahy13g0630 13 6587081 6589290 Ahy8g1070 8 25723380 25724647 PCT