Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0624 ATGGCCGTCAACGATGCTGACCAATCAAACAGGCCTCACAGGTCGCGCCATTCCGGTGCCAAGAAGGCCAAATCCGACAAGAAGAAGAAGCAGCAGCAGCGCCAAAACGACGATGGAGGAGACGAGAAGAGGCAAAACCCTAAGGCGTTCGCGTTCTCTTCCACCAACAAGGCCAAGCGCTTGCAATCACGCTCCGTCGAGAAGGAGCAGCGCCGCCTCCATGTTCCCATCGTTGACCGCTCCTATGGCGAGCCCCCACCTTATGTCGTCGTTGTGCAAGGTCCACCGCAGGTTGGGAAGTCCCTGTTGATAAAGTCTTTGGTCAAGCATTACACAAAGCATAATTTGCCTGATGTGCGAGGCCCAATTACTATTGTTTCAGGAAAGCAAAGGAGGGTTCAGTTTGTTGAATGCCCAAATGATATTAATGGTATGATAGATGCGGCAAAGTTTGCTGATCTAGCACTGCTGCTTATAGATGGATCCTATGGTTTTGAAATGGAAACATTTGAATTCCTTAATATATTGCAAACACATGGGTTTCCAAAGGTCATGGGTGTTCTTACTCATCTTGACAAATTCAAGGATGCTAAAAAGTTGAGGAAAAGAAAACAAGAATTAAAACGCAGATTTTGGACTGAAATATATGACGGAGCTAAATTGTTTTATTTATCGGGCCTTATTCATGGAAAGTATGTCAAGCGCGAAGTTCACAATCTCGCGCGGTTTATTTCCGTAATGAAGTTTCATCCTCTATCTTGGCGAACTTCTCATCCGTATGTTTTGGTGGATCGTTTTGAAGATATCACGCCTCCTGAAAAAGTGCATGCAAATAACAAGTGTGACAGAAAAATCACACTTTATGGTTATCTTAGAGGGTGTAATTTAAAAAAGGGAAATAAGGTACATATTGCTGGGGTGGGTGATTATAGTTTAACCGCTGTTACTGCTTTACCTGATCCTTGTCCTCTTCCATCTGCTGCTAAAAAGAAAGGACTGCGTGATAAGGAAAAGTTGTTCTATGCTCCTATGTCTGGCCTCGGGGATCTTTTGTATGACAAAGATGCTGTATACATAAATATTAATGATCACCTTGTGCAGTTTTCAAAAGTTGATGATGAAAACTCAGCCATGACAAGCAAAGGTAAGGACAGAGATGTGGGGGAGGTTTTGGTGAAATCTCTTCAAAATACCAAATACTCGATCAATGAAAAGCTAGAAAATAGCTTTATCAATATTTTTGGTCAAAAGCCGGAAATGTCATCAGAAGCTGTAGCTGATGCATTGGCTACACACAAAGATAACAAGCATGATAGCGAAGAAGATGTTTCAGATAGAGATCAGCATGGGAAAGCTATTGAAACTGGTGAAGATGGTGATGGTTCAGAATCATCTGATCAGGATGAAGCTGGTGCCATGATGGGTGAAGCCAGTTCTTCTGATGACAGAGATGATGATGCAACTGATATGAAAGCCATTCCTGGAGACTTGAAAGAACATGTTGAATTTAAAGACGGGAGACGAAGGAGGAAAGCAATATTTGGAAATGATGTTGATCAAAGTGATATGATGGATTCAAAAGAGGATAATGATGCTGCTAGTGATGATGCGGCTTCTTCTGATTCAGAATCTTTTAAAGAGGATGACGACGACGACGACGATGATGATGATGATGAGGACAATGATGACGACAATGAGGATGACACAGATGATGATGACATGGGGAATGTTTCAAAGTGGAAAGAATCTTTAGCGGAAAGGACACTCTCACGGAAAACTCCTAGTTTGATGCAACTTGTGTATGGTGAATCTACTGTTAATATGACCTCTATAAACAAACAGAATGATAGTAGTGACGATGAGGAAAGTGACGATGACTTTTTTAAGCCTATTGAAGAAGTAAAAAAGCAAAGCATGAAAAATGGACTGAATGATGGAATGGTCAACACTGAGGATTGTTCCAAGTGTGAACCTTCTGTGGATCAGAGATGGGATAAGAAAGATAACGAGGGAATCCGCAATCGTTTTGTCACTGGAAATTTGGCAAAAGCTGCTCTCAGAAATTCTCTGTCAAATGGTAACACTGAAGAGGAAAATGATGAAGTCTACGGAGATTTTGAAGATCTAGAAACAGGAGAGAAATATGACAATTACCAGACAGATGATGCAGTTGCCACAACAGTACACAAAGGAGACGATGCGGAGGCTGAGCAGAGGAGGCTCAAGAAACTTGCCCTACGTGCAAAATTTGATTCACAGTATGATGGCGATGAAGTTGAGACACCAGAGGAAGATGCGGGCAATGATGAGAAGTCCAAACCTCATGGTCAAGCCAATGAAAGTAGTTATTTTGATAAGTTGAAAGAGGAAATTGAGCTTCGGAAACAAATGAATATAGCTGAACTCAATGATCTTGATGAAGATACCAGGTTAGAGATAGAAGGCTTCCGAAATGGGACATACCTAAGATTAGAGGTTCATGATGTTCCTTGTGAGATGGTTGAGTACTTTGATCCCTACCATCCCATATTGGTGGGAGGGATCGGTCTAGGGGAGGAAAATGTTGGATACATGCAGGCTAAGCTAAAGAGGCACAGGTTCCATAAGAAAGTGCTGAAGACCAGAGATCCAATTATAGTTTCCGTTGGATGGAGGCGTTACCAAACAACACCAGTATATGCTACTGAGGATCTCAATGGAAGACTGCGAATGCTAAAATATACTCCAGAACATGCACATTGCTTTGCCTTTTTTTGGGGCCCTCTTGCCCCTCCCAACACTGGGATAGTGGCTGTTCAGAATTTATCAAACAATCAGGCAACGTTTAGGATTACTGCAACTGCCGTTGTACTCGAGTATAATCATGCAGCTAGGATAGTGAAGAAAATCAAATTGGTTGGTTACCCATGCAAGATATTCAAGAAAACAGCATTTATCAAGGATATGTTTACTTCAGATCTTGAAGTAGCTCGGTTCGAAGGTGCAGCCATTCGAACTGTCAGTGGGATCAGGGGGCAGGTCAAGAAGGCTGCAAAAGAAGAGATAGGTAACCAACCAAAAAGGAAGGGTGGGCAAACCAAAGAAGGAATTGCTCGGTGCACATTTGAAGACAAGATTCTGATGAGTGACATTGTTTTCCTGCGTGCATGGACTCAAGTTGAAGTCCCAGATTTTTATAATCCATTGACAACAGCATTGCAGCCTCGTGACAAGACCTGGTTAGGAATGCGCACTGTTGCAGAATTGAGAAGAGAACACAACCTTCCTATACCTTTAAATAAAGATTCACTTTACAAGAAAGTTGAAAGAAAAAGAAAGAAGTATAATCCACTGGTGATTCCGAAGTCTCTACAGGAAAAGCTTCCCTTTGAATCAAAACCCAAGAATACGCCTAAGCGGAAGAGGAAGTCACTTGATCAGAAAAGGGCTGTCGTCATGGAAAGCGCTGAACGTAAAATTTGTCGTCTTTATCAGCATTATCGACTTATCGCAAATAATTCGGAAAAGAAGCGAAAGATTAATGCAGAAAAGAAGAGGAAAGAACTCGAGAAGGAGAGAGCGAAGGATGAACTTCTGACGAGAAAGCGCCAGAGAGAGGAAAGACGAGTGAGATACCGTGCGCAAGACAAGCAGAACAAGAGAATGCGGAGAGCCGAAGCCTGA 3663 0.4226 MAVNDADQSNRPHRSRHSGAKKAKSDKKKKQQQRQNDDGGDEKRQNPKAFAFSSTNKAKRLQSRSVEKEQRRLHVPIVDRSYGEPPPYVVVVQGPPQVGKSLLIKSLVKHYTKHNLPDVRGPITIVSGKQRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQTHGFPKVMGVLTHLDKFKDAKKLRKRKQELKRRFWTEIYDGAKLFYLSGLIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVLVDRFEDITPPEKVHANNKCDRKITLYGYLRGCNLKKGNKVHIAGVGDYSLTAVTALPDPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYININDHLVQFSKVDDENSAMTSKGKDRDVGEVLVKSLQNTKYSINEKLENSFINIFGQKPEMSSEAVADALATHKDNKHDSEEDVSDRDQHGKAIETGEDGDGSESSDQDEAGAMMGEASSSDDRDDDATDMKAIPGDLKEHVEFKDGRRRRKAIFGNDVDQSDMMDSKEDNDAASDDAASSDSESFKEDDDDDDDDDDDEDNDDDNEDDTDDDDMGNVSKWKESLAERTLSRKTPSLMQLVYGESTVNMTSINKQNDSSDDEESDDDFFKPIEEVKKQSMKNGLNDGMVNTEDCSKCEPSVDQRWDKKDNEGIRNRFVTGNLAKAALRNSLSNGNTEEENDEVYGDFEDLETGEKYDNYQTDDAVATTVHKGDDAEAEQRRLKKLALRAKFDSQYDGDEVETPEEDAGNDEKSKPHGQANESSYFDKLKEEIELRKQMNIAELNDLDEDTRLEIEGFRNGTYLRLEVHDVPCEMVEYFDPYHPILVGGIGLGEENVGYMQAKLKRHRFHKKVLKTRDPIIVSVGWRRYQTTPVYATEDLNGRLRMLKYTPEHAHCFAFFWGPLAPPNTGIVAVQNLSNNQATFRITATAVVLEYNHAARIVKKIKLVGYPCKIFKKTAFIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQPKRKGGQTKEGIARCTFEDKILMSDIVFLRAWTQVEVPDFYNPLTTALQPRDKTWLGMRTVAELRREHNLPIPLNKDSLYKKVERKRKKYNPLVIPKSLQEKLPFESKPKNTPKRKRKSLDQKRAVVMESAERKICRLYQHYRLIANNSEKKRKINAEKKRKELEKERAKDELLTRKRQREERRVRYRAQDKQNKRMRRAEA* 1221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0624 1220 MobiDBLite consensus disorder prediction 30 45 - -
Ahy13g0624 1220 MobiDBLite consensus disorder prediction 430 458 - -
Ahy13g0624 1220 MobiDBLite consensus disorder prediction 1 69 - -
Ahy13g0624 1220 MobiDBLite consensus disorder prediction 542 573 - -
Ahy13g0624 1220 MobiDBLite consensus disorder prediction 766 783 - -
Ahy13g0624 1220 Gene3D - 88 250 IPR027417 -
Ahy13g0624 1220 CDD BMS1 49 278 IPR037875 GO:0005525
Ahy13g0624 1220 MobiDBLite consensus disorder prediction 430 661 - -
Ahy13g0624 1220 MobiDBLite consensus disorder prediction 1174 1220 - -
Ahy13g0624 1220 PANTHER BNAC08G44910D PROTEIN 10 423 - -
Ahy13g0624 1220 PANTHER BNAC08G44910D PROTEIN 477 1211 - -
Ahy13g0624 1220 MobiDBLite consensus disorder prediction 478 534 - -
Ahy13g0624 1220 MobiDBLite consensus disorder prediction 1119 1142 - -
Ahy13g0624 1220 SMART DUF663_2 723 1053 IPR007034 -
Ahy13g0624 1220 MobiDBLite consensus disorder prediction 574 588 - -
Ahy13g0624 1220 MobiDBLite consensus disorder prediction 15 29 - -
Ahy13g0624 1220 MobiDBLite consensus disorder prediction 753 783 - -
Ahy13g0624 1220 Pfam 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal 732 1054 IPR007034 -
Ahy13g0624 1220 ProSiteProfiles Bms1-type guanine nucleotide-binding (G) domain profile. 85 250 IPR030387 -
Ahy13g0624 1220 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 224 IPR027417 -
Ahy13g0624 1220 SMART aarp2cn2 236 322 IPR012948 GO:0005634|GO:0042254
Ahy13g0624 1220 Coils Coil 1163 1202 - -
Ahy13g0624 1220 Pfam AARP2CN (NUC121) domain 236 321 IPR012948 GO:0005634|GO:0042254
Ahy13g0624 1220 PANTHER RIBOSOME BIOGENESIS PROTEIN 10 423 IPR039761 GO:0042254
Ahy13g0624 1220 PANTHER RIBOSOME BIOGENESIS PROTEIN 477 1211 IPR039761 GO:0042254
Ahy13g0624 1220 MobiDBLite consensus disorder prediction 589 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0624 Ahy-Chr13 6537009 6545200 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0624 K14569 - gmx:100810906 1817.74