Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0608 ATGGGGTTGGAATCGCTTGGTGATTTGGCGATTCATGTCATTCTCAAGAAGTTGCCTCCCAAAGACGCTGGAAGGGTTTCCTGCGTCAGCAAAAGGCTTCGTTCTTCTGCCTCCGATGACCTAATTTGGATCAATTTCTGTCGCAACGATCTCTCCCTCTGTCACCCTCGTGATCCTCTCGGAAACCCTCTCCCTTCCTTCAAGGAAGCTTATCAATCATGGCGTCAAGCTTTTGGGAAGTATCCTTGGTCACTTGTTAAGCGTGTAAAGAGGTGCTGGGACAGAATAGAGGCTTGGCTGAACGATAATTTTCCCGAAGCTAAGGCGACTCTTTGTAAAGGTGCAACAGAAGAAGAGATTCTAGAGTTGGAGAGTGCCTTAAAAGTGAAGCTGCCACTTCCTACTAGGATTCTGTATCGCTTTCATAATGGTCAAGAAGTTGAAAAGGCAAATCTAGTAACTCATACATTTGGCAGTTCTTTGGGCATAATTGGTGGTTACTCATTCTATAGTCATTATGTGAACGTGTACCTGTTACCAATACGTCAGGTAATACGAGATACTCTGCAAGTTACGCGTAAATTAGGCTTCTTCAGGAGATCCAAGTATGTTCTTGTGGCTGCTTCGACCACTTACAGTGAAAAGTTGTTTTTCCTCAATTGCACCAATGGTCAACTATATGTTGGAACCAGAAATCTTCTTACAGAAGGGGAAATGATCCCTTGTGTACCCCATGAGCTGATTAAGTTAGGTCATGGGTTGAATAGTAAAGAGCAACAGGATGCCATGCTACTTTGGTTAGAAGAACACGGTCGCCGTTTACAGAATGGATTTGTCAAACTGCATGAAGAAGAAAATGTCAGAGCCATTAATCTTTTCCCTGAAGAACCTCCTCTTTGTTCTACAGCTATAACCAATGGTGTGAAGGTCCGCGCCTCTGCTCTGCTTATCCCTGAGTTGTCGGATCTTCAAGACGATGTTGAAAAATTCTTATTTGCCTATTCAATCCGTATGTCCCTTGAACCTCAAGGATGCATCATTAATGGGGTATCCTTCAACTCTTGCCAGCTTCATTGGAGGCACTGGATAATTCGTGCTGATGATATGGTAGTATCTGATGTTAATGGTGAAGCTGTTATCGGGAAGTTCCCACTTTTGTGTCCAGGTGATAAAGAATTTGTTTATCAGAGTTGCACACCTATACCAACATCATCAGGTTCTGTTGAAGGTTCTTTTACATTTGTACCTGGCAGATTGGCAGAACCAAAAGGAGACCCTTTTCTAGTTACAGTGGCAAGCTTCCCACTTAAGCTGCCAGATTATGTATTCTGA 1332 0.4324 MGLESLGDLAIHVILKKLPPKDAGRVSCVSKRLRSSASDDLIWINFCRNDLSLCHPRDPLGNPLPSFKEAYQSWRQAFGKYPWSLVKRVKRCWDRIEAWLNDNFPEAKATLCKGATEEEILELESALKVKLPLPTRILYRFHNGQEVEKANLVTHTFGSSLGIIGGYSFYSHYVNVYLLPIRQVIRDTLQVTRKLGFFRRSKYVLVAASTTYSEKLFFLNCTNGQLYVGTRNLLTEGEMIPCVPHELIKLGHGLNSKEQQDAMLLWLEEHGRRLQNGFVKLHEEENVRAINLFPEEPPLCSTAITNGVKVRASALLIPELSDLQDDVEKFLFAYSIRMSLEPQGCIINGVSFNSCQLHWRHWIIRADDMVVSDVNGEAVIGKFPLLCPGDKEFVYQSCTPIPTSSGSVEGSFTFVPGRLAEPKGDPFLVTVASFPLKLPDYVF* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0608 443 Pfam ApaG domain 324 415 IPR007474 -
Ahy13g0608 443 ProSiteProfiles ApaG domain profile. 302 443 IPR007474 -
Ahy13g0608 443 Pfam F-box domain 6 44 IPR001810 GO:0005515
Ahy13g0608 443 SMART fbox_2 6 46 IPR001810 GO:0005515
Ahy13g0608 443 Gene3D - 3 95 - -
Ahy13g0608 443 PANTHER F-BOX PROTEIN SKIP16 1 443 - -
Ahy13g0608 443 Gene3D ApaG domain 300 443 IPR036767 -
Ahy13g0608 443 SUPERFAMILY SMI1/KNR4-like 92 182 IPR037883 -
Ahy13g0608 443 ProSiteProfiles F-box domain profile. 1 46 IPR001810 GO:0005515
Ahy13g0608 443 SUPERFAMILY ApaG-like 304 443 IPR036767 -
Ahy13g0608 443 SUPERFAMILY F-box domain 4 78 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0608 Ahy-Chr13 6326444 6330111 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0608 K10290 - gmx:100778108 702.205