Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0600 ATGGCTACTTCGTTGTTCCGGAGCATTCGGAGAGCTTCCTCTCTTCTCAAATTCTCGTACTCAACTACCTCCTTTTCGGTTTCTCCCAGGTCAGTTGTGAGGTCCCGGATATCGGTTTTCTTACCGTTTAGGCAATGCAATTCAGTTGGGAAGCCGAGTTCATGGTGGGGTTTCAGAGAGTTGAGCTATGGCACTGTGAACTTGGTTATATCGGAAGGGAAGACCAAGTTTGAGGCTCGCGAGGTTGAGCCGCCAAGGAAGGACAAATATAAAACTAAGAAGAAGCTGAAGATGCAGAGGAAGAGGGAGAAGGAGAAGAGGAAAGCTGCAAATAGGAGAGACCCTCGTTGGCTTGGTGTCAAGGGGAAGAAGAAGCAGAAGTTTGCCAATGCAGAAGAGAGAATCAAGTGCAAGCTTGAGAAAGCAAGAATTAAGGAATCAATGCTCATTGAAAGACTCAAAAGATATGATGTTCCTAAAGCTCAGGGTCCTGTTGCCAAACCTGATGGTTTGACGGGGGAGGAACGATTTTATTTGAAGAAGATGGCTCAGAAGAGTTCTAATTATCTACAAGTTGGCCGAAGAGGATTATTTGGAGGGGTTATTCTTAATATGCATATGCATTGGAAGAAACATGAGACTGTTAAGGTCATATGCAAGCCTTGTAAACCTGGCCAAGTACATGAGTATGCACAAGAACTTGCTAGATTGAGTGGTGGTATTCCAATCCACTTCATTGGAGATGACACTATAATATTTTATCGCGGAAAGAACTATGAACAGCCCGAGGTTATGTCACCAGTAGATACATTATCCAAGAAAAAGGCACTTGAAAAATCCAAGTATGAGCAATCTCTTGAATCAGTTAGGCGCTTCATCGCTATCGCTGAGAAAGAACTAGAGCTATATTACAGGCATATCGCACTCTACGGCAATCCGAACGACCGTAATCCCTTATCAGTTCTTGAGGGCCCAAGTGGAGACTCCATCAGAAAAGGGTACCATAGGATTCATAAACAAAGTAACCCTGAGTTGATTAATGATCTTGCTGATTCCAAAGAAATGGGGCTATCAGAATCTGAAGATAATAACAATGAAGATGAAAACTTGTCAATGGATGAATCAGATTCTGAAGAGGACAGCATGCTAGATACTAGTGATGATGATAAAGAAAGTGAGGAATGTTTTACTAATTTGAAAGATGCAAGTGCAAGCTCAAGAGCTGGTACATCACCATCAATGTCTAAACATACCTACCATTATAGTAATTGTAATAATCAATGTTTATTATCCAAACAAATGCTATGCACTAGAGATTAG 1320 0.4159 MATSLFRSIRRASSLLKFSYSTTSFSVSPRSVVRSRISVFLPFRQCNSVGKPSSWWGFRELSYGTVNLVISEGKTKFEAREVEPPRKDKYKTKKKLKMQRKREKEKRKAANRRDPRWLGVKGKKKQKFANAEERIKCKLEKARIKESMLIERLKRYDVPKAQGPVAKPDGLTGEERFYLKKMAQKSSNYLQVGRRGLFGGVILNMHMHWKKHETVKVICKPCKPGQVHEYAQELARLSGGIPIHFIGDDTIIFYRGKNYEQPEVMSPVDTLSKKKALEKSKYEQSLESVRRFIAIAEKELELYYRHIALYGNPNDRNPLSVLEGPSGDSIRKGYHRIHKQSNPELINDLADSKEMGLSESEDNNNEDENLSMDESDSEEDSMLDTSDDDKESEECFTNLKDASASSRAGTSPSMSKHTYHYSNCNNQCLLSKQMLCTRD* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0600 439 Coils Coil 93 113 - -
Ahy13g0600 439 MobiDBLite consensus disorder prediction 90 107 - -
Ahy13g0600 439 Pfam CRS1 / YhbY (CRM) domain 171 255 IPR001890 GO:0003723
Ahy13g0600 439 Gene3D - 171 269 IPR035920 -
Ahy13g0600 439 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 1 391 IPR040286 -
Ahy13g0600 439 MobiDBLite consensus disorder prediction 361 391 - -
Ahy13g0600 439 MobiDBLite consensus disorder prediction 354 416 - -
Ahy13g0600 439 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 1 391 - -
Ahy13g0600 439 SMART CRS1_YhbY_2 171 255 IPR001890 GO:0003723
Ahy13g0600 439 MobiDBLite consensus disorder prediction 398 416 - -
Ahy13g0600 439 SUPERFAMILY YhbY-like 171 265 IPR035920 -
Ahy13g0600 439 ProSiteProfiles CRM domain profile. 169 266 IPR001890 GO:0003723
Ahy13g0600 439 MobiDBLite consensus disorder prediction 80 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0600 Ahy-Chr13 6249262 6252509 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0600 - - ahf:112769128 649.818