Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0587 ATGACGGTAGCTGCGGGAATCGGTTACGCACTGATAGCTCTAGGACCTTCTCTCTCCATCTTCGTTTCCGTCATTTCCAAAAAGCCCTTCTTGATTCTCACTGTTCTCTCCAGTACACTGTTGTGGCTTATGAGTTTGATTGCACTGTCTGGAATATGGAGAGGTTTTCTGCCACTCAAAACTACTTCATGGTGGCCATATGCTATACTTATACTCTCATCCATTGCTTTTCAAGAAGTCCTTCGCCTTCTCTTCTGGAAAATTTACAAGAGGTTGGAAGATACTTTAGATGCTTTTGCTGATAGAGTAGCGAAACCACATTTGTTCCTGACGGATAAGATGCTGATAGCGCTTGCTGGTGGTTTGGGTCATGGTGTCGCGCATGCTGTGTTCTTCTGCATCAGCGTATTGACTCCTGCTTTTGGTCCTGCTACTTATTTTGTCGACCAATGTTCGAAGGTTCCATTTTTCCTTCTTTCTGCCCTTATTGCTCTTGCATTCGTCACAATCCATACTTTCTCGATGGTCATCGCATTTAATGGGTATGCTGAGGGGAACAAAGTGGACGAGTATTTTGTTCCCATTGTTCACGTGGTTGCAGGAGTTCTGACTCTGATAAATTTGGCTCCTGGGGGTTGCACTGTTGGCATTCCTCTCCTTTACATCGTTGCGATCTTGACATTGTTTCACTGTGGGAGGATGGTTTGGAGAAGATTATTGACAGAAAATAGAATAAGTCTCAATCACTCATAG 753 0.4396 MTVAAGIGYALIALGPSLSIFVSVISKKPFLILTVLSSTLLWLMSLIALSGIWRGFLPLKTTSWWPYAILILSSIAFQEVLRLLFWKIYKRLEDTLDAFADRVAKPHLFLTDKMLIALAGGLGHGVAHAVFFCISVLTPAFGPATYFVDQCSKVPFFLLSALIALAFVTIHTFSMVIAFNGYAEGNKVDEYFVPIVHVVAGVLTLINLAPGGCTVGIPLLYIVAILTLFHCGRMVWRRLLTENRISLNHS* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0587 250 PANTHER GAMMA-SECRETASE SUBUNIT APH-1 1 239 IPR009294 GO:0016021|GO:0016485|GO:0043085
Ahy13g0587 250 Pfam Aph-1 protein 2 237 IPR009294 GO:0016021|GO:0016485|GO:0043085
Ahy13g0587 250 PANTHER GAMMA-SECRETASE SUBUNIT APH-1 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0587 Ahy-Chr13 6154096 6156595 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0587 K06172 - gmx:100794637 419.853