Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0580 ATGATAAAGCCTCATCTTTTGCATCAATCATACCAAAAAACCAACCATACCTTCTTCTCTCTTCATAGGCCATACTTCCATGGCGGCCGCGGCGACATTGGCGCCAACAAAATTAGAACTTTATCAACTCTTCCACTACTATGGCCGGCTCATGCGAAGAAGAGGGAAAGACTTAAGCGCCTTGTCCTTCCCCCTCCTCGCGCGCAAGCTAGCCCTAGTTCTTCAGCTACCACAAAAGACATAGATGATGATCATCATCATGTTATTGATGACACCAATGAGAATAAGGACATTGGTGTTGTGAATGTTAAAGCGGTGGTTAAGGTGAAGTTAACAAAGGCTGGATTTTTTTCAAGTCTTAGTTTGGACCGTGGAATTGATGATTTAACTGATTTGCTTGGTAAATCTGTCTTGTTGGAACTTGTTAGCTCCCACCTTCACGATTCTGAGGGTGGAAAGGAGAAGGAGACAATTAAAGCATACGCACACAAAGCAGGGGGAGATGAGAAGTCGGTTAAGTATGAAAGCGATTTTGAAGTAGCAAATGATTTTGGAGAGATTGGTGCAGTTCTTGTTGAGAATGAGCATCACACTGAGATGTTCCTTGAAACCATTACCCTCCATGGCCTCCCGGAGGGTCCTGTTCATTTTGATTGTGCTTCATGGGTTCATTCTAAGTTCGATAATCCCACCAAAAGAATATTCTTCACCAATAAGTGTTACTTACCATCGGAAACCCCGAGTGGTTTAAGAAGATTAAGAGCAGAAGAATTGAGTAACCTGAGAGGGAATGGAGAAGGAACACGAAAAAGCTTTGAAAGAATTTACGATTACGACATTTACAATGACATTGGTGATCCAGACAGAAGCCTTGATCTTCAGAGGCCTCCGTTAGGCGGCAAAGAACGACCTTATCCCCGCCGTTGCCGAACCGGCCGTCCACACTCCCAAGCAGATCGTTGGTCAGAGAATAGGAATAATGGAAAAAAATTCTACGTTCCAAGGGATGAGTGCTTCTCGGAGGTGAAGGAGCTAACGTTCTCAACAAAGGCACTGCACGCGGTGCTTCTGATACTGGTTCCGTCGCTGGGGAAAATCATCAAAGACAAGGATCTTGAGTTCCCGTTCTTCCATGAGATTGATTCACTCTTCAGCGTCGGACTTGATTTGCCTTCTGAAGCTGATGATGCAACTGAGGAAGGATTTCTTGGAGCCATGATGCCTAGGCTTGTCAAATACATTTCCGGTGGTGATCGCCAAAATGTTCTTCGCTTCGAGACCCCTGAGACAATGAACAGGGATAGATTTTTCTGGTTTAGGGATGAGGAATTCGCTAGACAGACTGTTGCTGGCCTCAACCCACTTAGCATAAGTTTGGTCAAGGAATGGCCTTTGAGGAGCAACCTTGACCCAGGTAAATACGGTCCACAAGAATCAGCAATTACTTCTGAAATTATCAATAAAGAGATAGGAGGAATAATTACCGTAGAAAAGGCTATTGAAGAAAAGAAGTTGTTCATTTTGGACTACCATGATATACTATTACCATATGTTAGCAAAGTAAGGAAACTGAAGGGGAAAACACTGTATGGGTCAAGAACTTTGTTCTTTCTAACTCCAGAAGGGACACTGAGACCTCTTGCCATTGAACTTACAAGACCTCCTATGGATGGAAAAAAGCAATGGAAGCAAGTCTTCACTCCTTCTTGGCACTCAACAAGTGTTTGGCTATGGAGGATTGCTAAGGCCCATGTTCTTGCACATGACTCTGGCTATCACCAACTTATTAATCATTGGTTAAGAACTCACTGTGTGACAGAGCCGTATGTTATTGCAACAAATAGACAACTTAGTATAATGCATCCTATATATAAATTGCTACACCCTCATTTTCGTTACACATTAGAGATTAATGCATTGGCACGAGAAGCACTTATTAATGCTGATGGCACAATTGAGAGCTCATTCGCACCGGGAAAGTATGCCATGGAGATTAGCTCTGCTGTCTATCATCATCATTGGCGATTTGACATGGAATCTCTACCTGCAGACCTAATCAGAAGGGGAATCGCCATAAAAGATCCATTTGAACCACATGGGCTAAGACTAACAATCAAAGATTACCCTTTTGCCAATGATGGACTCCTTTTATGGGACATTATCAAGCTATGGGTGACGGATTATGTGAACCATTATTACCCCAATTCAAGTGTTGTGGAGCATGATGAGGAGCTTCAAGCATGGTGGAAAGAGATAAGAACAGTTGGACATGGTGACAAAAAGGATGAACCATGGTGGCCAATTCTCAAGACTCCAAAGGACTTAATTGGAATTCTAAGCACAATAATTTGGGTAACTTCTGGTCACCATGCAGCTGTAAACTTTGGTCAATACACATATGGTGGTTACTTCCCAAATAGGCCAACAATTGCAAGGACCAAAATGCCCTCGGAAGACCCTTCAGAAGAAGAGTGGAAGGAGTTCCTTAAGAAGCCTGAAAGAGCACTTCTTAAGTGTTTTCCTTCTCAGCTTCAAGCAACAAGAGTCATGGCCGTCTTGGATATTCTCTCCACTCATTCGCCGGACGAGGAGTACATCGGCGAGAAGATGGAACCTTCTTGGGGTGAAGACCCTGTTATAAGAGATGCATTTGAAAGGTTTAAAGCCAGATTGAAGAAACTTGAAGTACTCATTGATGAGAGGAATGAGAATACAAAGTTGAAGAACAGAAATGGTGCTGGTATTGTTCCTTATGAACTTTTGAAGCCTTTTTCAAAGCCAGGAGTCACTGGAAAGGGGGTTCCTTGCAGCATTTCCATTTGA 2823 0.4304 MIKPHLLHQSYQKTNHTFFSLHRPYFHGGRGDIGANKIRTLSTLPLLWPAHAKKRERLKRLVLPPPRAQASPSSSATTKDIDDDHHHVIDDTNENKDIGVVNVKAVVKVKLTKAGFFSSLSLDRGIDDLTDLLGKSVLLELVSSHLHDSEGGKEKETIKAYAHKAGGDEKSVKYESDFEVANDFGEIGAVLVENEHHTEMFLETITLHGLPEGPVHFDCASWVHSKFDNPTKRIFFTNKCYLPSETPSGLRRLRAEELSNLRGNGEGTRKSFERIYDYDIYNDIGDPDRSLDLQRPPLGGKERPYPRRCRTGRPHSQADRWSENRNNGKKFYVPRDECFSEVKELTFSTKALHAVLLILVPSLGKIIKDKDLEFPFFHEIDSLFSVGLDLPSEADDATEEGFLGAMMPRLVKYISGGDRQNVLRFETPETMNRDRFFWFRDEEFARQTVAGLNPLSISLVKEWPLRSNLDPGKYGPQESAITSEIINKEIGGIITVEKAIEEKKLFILDYHDILLPYVSKVRKLKGKTLYGSRTLFFLTPEGTLRPLAIELTRPPMDGKKQWKQVFTPSWHSTSVWLWRIAKAHVLAHDSGYHQLINHWLRTHCVTEPYVIATNRQLSIMHPIYKLLHPHFRYTLEINALAREALINADGTIESSFAPGKYAMEISSAVYHHHWRFDMESLPADLIRRGIAIKDPFEPHGLRLTIKDYPFANDGLLLWDIIKLWVTDYVNHYYPNSSVVEHDEELQAWWKEIRTVGHGDKKDEPWWPILKTPKDLIGILSTIIWVTSGHHAAVNFGQYTYGGYFPNRPTIARTKMPSEDPSEEEWKEFLKKPERALLKCFPSQLQATRVMAVLDILSTHSPDEEYIGEKMEPSWGEDPVIRDAFERFKARLKKLEVLIDERNENTKLKNRNGAGIVPYELLKPFSKPGVTGKGVPCSISI* 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0580 940 SUPERFAMILY Lipoxigenase 242 940 IPR036226 -
Ahy13g0580 940 Gene3D PLAT/LH2 domain 87 241 - -
Ahy13g0580 940 SMART LH2_4 103 238 IPR001024 GO:0005515
Ahy13g0580 940 Pfam Lipoxygenase 249 923 IPR013819 GO:0016702|GO:0046872
Ahy13g0580 940 Gene3D - 437 570 - -
Ahy13g0580 940 PRINTS Plant lipoxygenase signature 233 254 IPR001246 GO:0016491
Ahy13g0580 940 PRINTS Plant lipoxygenase signature 530 554 IPR001246 GO:0016491
Ahy13g0580 940 PRINTS Plant lipoxygenase signature 853 867 IPR001246 GO:0016491
Ahy13g0580 940 PRINTS Plant lipoxygenase signature 272 288 IPR001246 GO:0016491
Ahy13g0580 940 PRINTS Plant lipoxygenase signature 371 392 IPR001246 GO:0016491
Ahy13g0580 940 PRINTS Plant lipoxygenase signature 207 225 IPR001246 GO:0016491
Ahy13g0580 940 PRINTS Plant lipoxygenase signature 462 481 IPR001246 GO:0016491
Ahy13g0580 940 PRINTS Plant lipoxygenase signature 304 323 IPR001246 GO:0016491
Ahy13g0580 940 MobiDBLite consensus disorder prediction 291 323 - -
Ahy13g0580 940 Pfam PLAT/LH2 domain 152 236 IPR001024 GO:0005515
Ahy13g0580 940 PANTHER LIPOXYGENASE 51 939 IPR000907 GO:0016702|GO:0046872
Ahy13g0580 940 PANTHER LIPOXYGENASE 51 939 - -
Ahy13g0580 940 Gene3D - 242 342 - -
Ahy13g0580 940 ProSiteProfiles PLAT domain profile. 116 237 IPR001024 GO:0005515
Ahy13g0580 940 MobiDBLite consensus disorder prediction 301 323 - -
Ahy13g0580 940 MobiDBLite consensus disorder prediction 63 87 - -
Ahy13g0580 940 CDD PLAT_LH2 124 238 IPR042057 -
Ahy13g0580 940 Coils Coil 884 904 - -
Ahy13g0580 940 ProSitePatterns Lipoxygenases iron-binding region signature 2. 620 630 IPR020834 GO:0016702|GO:0046872
Ahy13g0580 940 ProSitePatterns Lipoxygenases iron-binding region signature 1. 593 607 IPR020833 GO:0016702|GO:0046872
Ahy13g0580 940 PRINTS Lipoxygenase signature 575 592 IPR013819 GO:0016702|GO:0046872
Ahy13g0580 940 PRINTS Lipoxygenase signature 613 633 IPR013819 GO:0016702|GO:0046872
Ahy13g0580 940 PRINTS Lipoxygenase signature 593 610 IPR013819 GO:0016702|GO:0046872
Ahy13g0580 940 Gene3D - 343 435 IPR027433 -
Ahy13g0580 940 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 102 241 IPR036392 GO:0005515
Ahy13g0580 940 Gene3D - 572 939 - -
Ahy13g0580 940 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 240 940 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0580 Ahy-Chr13 6074581 6084676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0580 183 940 Acyl Lipid Metabolism Gene Families AT3G45140 59.790 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0580 K00454 - gmx:100797626 1448.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0580 13 6074581 6084676 Ahy13g0580 13 6074581 6084676 ECH