Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0574 ATGGATAAATACTTGGTCCCGTTGAAACCCTCAGCGGAAAAGGTTCATCCTCTTCCTAGAATTGCAAGGTGCCGTTGGAAAAGGAGCAATGTTGAACTGAATGGAAGATTTGAACCTAACTATTGCCATGAGATGCTGGATTTGCTAAGTCGTTCCTACTCTGAGGTGGGTGCTTTTCCGCATCTGTATCATGCAGATGAGACGCCTTGCGAATCGCATATCCAACGGGCTATTACCAGAGCAAATGGTGATGGAAATCTTCCATCCAAGCAAGGCATCTCTGCAGTGGACTTTGACAACAAGGGAATATACTTGGCATCTGTGACAAAGTTGGGATGCTTAACAGTTCATGACTTTGAAGCTCTTTATTGTCAGACACATAAACAAACTTGCTTGAAAGAAGACGAAAGCAAGCATTTACTGCATCTCTCACTAAAACGACAACTTGATACTGTTAGATGGAATCCTATTAACCAGGATGAGGTTGTCTGTGCATCTGTAAAAAGTAGTGAAGTACTTATATTTGATGTTGGATATGTATCATCAGAGCCAATTGAAGTGTTGAGGACACGAAATACAGCAACAGTTCATGGGTACAACGGACACAAAGGTCTCTCTGATGTTGCCTTCACGTCAAATGACTCATGGATACTTGCCTCTGATACACATGGTGGGATCAATGTTTGGGATAGAAGAGTGAAAGCTCTACCTTCTCTTGAGCTTACATCTGGTTCATCTAGTACCCTAAACAGCATCCAAATAAATGTTGAAAATCAGATTATTTTTGGTGCTGGGAAGAGTGGCTTTGTGTACATGTGGGACATTCGTGGCGGAAGAGCATCTACTACTTTTCAGAGTCACAAAGAGATGTGTCATCCTCCTATAACATCGTTGAAGTTGGCAACATTACTAGAGAAGATTGGATCTTTGAAGGCACAAGCTAATATTGTTTGCAAAGAGATTCATTCTATTCGATTCAATCCATGTTGCCCATATCAGCTAGCATTCCATCTTGATGATGGCTGGTCGGGTGTTTTAGATATTAATACTTTACAAGTTACACACATTCATTGCCCTCCCCCAGCTTGGTTAAATGATTCCTATCTTCCTATAGATCTATCATATATAAGAAAACCTTCATGGTTATCTACATGTTCGATCTATTTGGTTGGTTCATCATCTGATAGTGGCATTCATCTCTTAGATTTCTACCCTAGTACCAGCTCGCCGAGCCATGTGCATTACAAAGAGGATACTGATAATGTTTCCAAGATGAATAGGAGTCAAAATAATCAAAACAGATTTATTCCTTTATCTGAAGGAGTTATTTCATGTGCTGCACATCCTTTATATAATGCCATCGTAGTAGGAACAAAGAAGACATCTTTGCTCGTGATTTCACAAAGACGAAGGTCAAACAGTGAAGAAGATTAG 1434 0.4017 MDKYLVPLKPSAEKVHPLPRIARCRWKRSNVELNGRFEPNYCHEMLDLLSRSYSEVGAFPHLYHADETPCESHIQRAITRANGDGNLPSKQGISAVDFDNKGIYLASVTKLGCLTVHDFEALYCQTHKQTCLKEDESKHLLHLSLKRQLDTVRWNPINQDEVVCASVKSSEVLIFDVGYVSSEPIEVLRTRNTATVHGYNGHKGLSDVAFTSNDSWILASDTHGGINVWDRRVKALPSLELTSGSSSTLNSIQINVENQIIFGAGKSGFVYMWDIRGGRASTTFQSHKEMCHPPITSLKLATLLEKIGSLKAQANIVCKEIHSIRFNPCCPYQLAFHLDDGWSGVLDINTLQVTHIHCPPPAWLNDSYLPIDLSYIRKPSWLSTCSIYLVGSSSDSGIHLLDFYPSTSSPSHVHYKEDTDNVSKMNRSQNNQNRFIPLSEGVISCAAHPLYNAIVVGTKKTSLLVISQRRRSNSEED* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0574 477 Gene3D - 122 474 IPR015943 GO:0005515
Ahy13g0574 477 ProSiteProfiles Trp-Asp (WD) repeats profile. 242 283 IPR001680 GO:0005515
Ahy13g0574 477 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 1 476 - -
Ahy13g0574 477 PANTHER WD40 REPEAT PROTEIN 12, 37 1 476 - -
Ahy13g0574 477 SMART WD40_4 234 274 IPR001680 GO:0005515
Ahy13g0574 477 SMART WD40_4 192 230 IPR001680 GO:0005515
Ahy13g0574 477 SMART WD40_4 80 118 IPR001680 GO:0005515
Ahy13g0574 477 SUPERFAMILY WD40 repeat-like 90 457 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0574 Ahy-Chr13 5994960 6006094 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0574 - - gmx:100780441 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0574 13 5994960 6006094 Ahy13g0574 13 5994960 6006094 ECH