Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0526 ATGGCTGAAGCATCAAACATTGGTAGCCAAAGCAGTAGATGGTCCCTTCAAGGGTTGACAGCCCTCGTTACTGGTGGATCCAAAGGAATCGGGTATGCAATTGTGGAAGAGTTAGCAGGGCTAGGGGCCAGGGTACACACTTGTTCTAGGAACGAAGCTCAACTTAATGAGTCCTTACATGAATGGAGTGCAAAGGGATACCATGTCACAGGTTCTGTATGTGACATGGCGTCTCGTCCGCAGAGAGAAGACCTCATTGCTAAAGTCTCTGGTTTGTTTAACGGCAAACTTGACATCCTTGTGAACAATGTTGGAACCAATTTTCAAAAGGAGACCACTGAGGTCACAGAGGAAGACTTCAGATTCCTTGTGAGCACGAATCTTGAATCTGCTTTCCACATAAGCCAGCTTGCTTATCCACTCCTCAAATCATCACAGGCTGCAAGCATAGTCTTCATATCCTCCATTGCAGGCGTGGTCTCACTAGACATGAAAGGAACCATATACAGTGCAGCAAAAGGAGCAATCAACCAACTGACAAGGAATTTGGCATGTGAATGGGCAAAACATAACATAAGGACTAATTGCATTGCGCCGGGGCCAATCAAAACCAGTCTGGCTGAAAGGGTATTAAACTTAGACGGAGAGACAAAACTGTTGGATGCTTTTGTTTCGCGAACTCCTCTTGGACGGATGGGAGAGGCAGGGGAGGTGTCTTCCATTGTAGCATTTCTTTGCATGCCTGCGGCTTCTTACATAACTGGACAGACCATTTGTGTCGATGGCGGCTTAACTGTCAACGGTGTCTAA 810 0.4654 MAEASNIGSQSSRWSLQGLTALVTGGSKGIGYAIVEELAGLGARVHTCSRNEAQLNESLHEWSAKGYHVTGSVCDMASRPQREDLIAKVSGLFNGKLDILVNNVGTNFQKETTEVTEEDFRFLVSTNLESAFHISQLAYPLLKSSQAASIVFISSIAGVVSLDMKGTIYSAAKGAINQLTRNLACEWAKHNIRTNCIAPGPIKTSLAERVLNLDGETKLLDAFVSRTPLGRMGEAGEVSSIVAFLCMPAASYITGQTICVDGGLTVNGV* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0526 269 Gene3D - 3 269 - -
Ahy13g0526 269 PRINTS Glucose/ribitol dehydrogenase family signature 95 106 IPR002347 -
Ahy13g0526 269 PRINTS Glucose/ribitol dehydrogenase family signature 169 188 IPR002347 -
Ahy13g0526 269 PRINTS Glucose/ribitol dehydrogenase family signature 190 207 IPR002347 -
Ahy13g0526 269 PRINTS Glucose/ribitol dehydrogenase family signature 228 248 IPR002347 -
Ahy13g0526 269 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Ahy13g0526 269 PRINTS Glucose/ribitol dehydrogenase family signature 20 37 IPR002347 -
Ahy13g0526 269 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 156 184 IPR020904 GO:0016491
Ahy13g0526 269 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 266 IPR036291 -
Ahy13g0526 269 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 2 269 - -
Ahy13g0526 269 PANTHER TROPINONE REDUCTASE 2 269 IPR045000 GO:0016491
Ahy13g0526 269 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Ahy13g0526 269 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 IPR002347 -
Ahy13g0526 269 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 IPR002347 -
Ahy13g0526 269 Pfam Enoyl-(Acyl carrier protein) reductase 27 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0526 Ahy-Chr13 5514842 5516183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0526 13 268 Miscellaneous Gene Families AT2G29290 64.844 6.76e-116 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0526 K08081 - gmx:100780806 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0526 13 5514842 5516183 Ahy13g0526 13 5514842 5516183 ECH