Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0487 ATGGCTCAACTCGAACGCCCTCAGAGACCTGGTGTTGAAACTTCAAAAACTCCCACCATCCATACCATGGAACAACTCCTCCGAGGAGAAGGGTCTAAAGTGTCACCAAAAGGTTCTAAGCTATCGCCAACAGGTTCTAAGATGTCAACCAACACTGCCACCTTGTCCTCCTCCTCCACCTCCTCCACTTCTAATTCATCACCTTTTTTCAATAAGTTGAGGCACCATGACTCGGAAGAAGACCATAGCCCGAACCAGAAGAAATCAGTCCTTGCCAAAGTGAAGGAGAAGGCTAAGAAATTGCGTCACAGCCTCAGCAAGAAAAAGCACGACGATGGAAACCAAACTCCCTCACCCAGCTCTGGCTTGGAAGACGAAGGAACACACGACGAAGCTGAATACCATGGAGCTCCAAGTAATCAAGACCTTAACTTTCAATTTTCTGAAAAGGTTTCTCTTAACTTTGATCTTATGTTGCTGTGTAAAATTATTATTTCAGTGTACGAATCTGAGAAGGCACATCAACCAAAATCAGGTCTAGGAATGCAAGAAAAATGTTTAACTCGGTCCTTCTCCAAGAGAACAACTCATCCAGCAACTGTGGCTAATGCTGCAGCTGGAGCTGCTACTAGCACCAATACTATTGATGCTGGTTCGAACAGGGTAGCGACGACTAGAACCTTAGCTCATGAACTGAACAAAGGATCACATTCTATGACTTCCAAGTTTCAAGGCCTCACTATTTACAAACCTGATGAGCTTCACACTTCAACATCACCAAAGGATGGAACTCAAAGTAGTTTTTTTGTTTCTGCTCCAAGTACACCTCCAAAGACATCTTCCCAAACTTCTCCAAGCGCAGCACGAATTTGGTCAGCTCCAGTGACCCCAAAAACTTTGGCTCCAGTGTCACCACAGACTCCTTCATGTTCATCTGCTCCAACTACTGGCAGGTATGCCAGCCCTGGCTCGCAGATATGGGATAAGGGTGTTTCGGTGAAAGAGTACTTGATGAACAAGCTTGAGCCGGGAGAAGATGAAAAAGCTTTGTCTCAGGTGATATCTGAGGCCATGAGTCCAAAGAGAACTCCAGGTGATGCAGGTGTGATGGAGAAGGTGAGAGAAGCTGTAACTTCTTTGCTCCGAACCGAGGAACCAAAACAAGAAGACACAACAACCACTATCACGACCACTGACACCAACATTGCAAGCACATCCTATCAAAACCCAGTATCTATCAGTGCTGCTCGCAGTTCATCTCAAATTCCAGTATCTACCAATGCTCTAGAAGTGGTTCAGGAAGAAAACCATGAAAGAATTCTTCAGGCAAATTGA 1335 0.4517 MAQLERPQRPGVETSKTPTIHTMEQLLRGEGSKVSPKGSKLSPTGSKMSTNTATLSSSSTSSTSNSSPFFNKLRHHDSEEDHSPNQKKSVLAKVKEKAKKLRHSLSKKKHDDGNQTPSPSSGLEDEGTHDEAEYHGAPSNQDLNFQFSEKVSLNFDLMLLCKIIISVYESEKAHQPKSGLGMQEKCLTRSFSKRTTHPATVANAAAGAATSTNTIDAGSNRVATTRTLAHELNKGSHSMTSKFQGLTIYKPDELHTSTSPKDGTQSSFFVSAPSTPPKTSSQTSPSAARIWSAPVTPKTLAPVSPQTPSCSSAPTTGRYASPGSQIWDKGVSVKEYLMNKLEPGEDEKALSQVISEAMSPKRTPGDAGVMEKVREAVTSLLRTEEPKQEDTTTTITTTDTNIASTSYQNPVSISAARSSSQIPVSTNALEVVQEENHERILQAN* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0487 444 MobiDBLite consensus disorder prediction 37 71 - -
Ahy13g0487 444 Coils Coil 91 111 - -
Ahy13g0487 444 MobiDBLite consensus disorder prediction 253 290 - -
Ahy13g0487 444 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 55 444 IPR037491 GO:0009737
Ahy13g0487 444 MobiDBLite consensus disorder prediction 253 324 - -
Ahy13g0487 444 MobiDBLite consensus disorder prediction 72 92 - -
Ahy13g0487 444 MobiDBLite consensus disorder prediction 299 322 - -
Ahy13g0487 444 PANTHER LOW-TEMPERATURE-INDUCED PROTEIN 55 444 - -
Ahy13g0487 444 MobiDBLite consensus disorder prediction 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0487 Ahy-Chr13 4982480 4984581 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0487 - - adu:107477082 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0363 18 3135975 3137961 Ahy13g0487 13 4982480 4984581 PCT
Ahy13g0487 13 4982480 4984581 Ahy18g0363 18 3135975 3137961 PCT