Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0378 ATGTCGGCACCGCAGAGGCTTCTCTGCACTCTCTCTTCCAGAACCTTCCTCTTACTTCCATTTTCCCATCCCTACAGAACTCTCGCTTCTCCTCCTTCTCCTTTCTCACTCATCCCAATGCCTCGCAATCAGCGGAGGGGACAACAATGGAAGGAGAAACCGAAACGCGAAGGGGAATTATCGGCTGCGGCTGCGGCTGGGGGAGGTGCAATTACTTCTTCTGCTTCAGCTGGAACAGTTACTAACGGCCTTGCCGGATTGCGTATTGCTGAAAGCGGGGCGGCGAAAACCAGTGTTGGAGCTGGTGTCCAAGATAGGAAGGTGATTTGGAAACCGAAATCTTATGGAACTGCGAGTGGAGTCGCAACTGCCGAAGCTGAAATGGCTGGTAAAGGTGCAGCTGATGCTGATGCTGCTGCTGCTGCTGCAGGGGCTGAAGCTGTTGTGGCTTCGCCCAAAACGAGTGGTAGTCCCAGTTTGAGCAAGTTGTTTAGCGGTAATTTGTTGGAGAAATTTACTGTGGACAACTCCACATACTCGCAGGCGCAAATCAGAGCTACTTTCTACCCAAAATTCGAGAATGAGAAGTCAGATCAAGAGATAAGGATAAGAATGATTGAGATGGTAGCTAAAGGTTTGGCTACGTTAGAGGTTTCTCTCAAACACTCTGGTTCTCTTTTTATGTATGCGGGTCATGAAGGTGGAGCTTATGCGAAAAATAGTTTTGGAAATATATATACTGCTGTTGGTGTATTTGTACTTGGGCGGATGTTTCGCGAGGCTTGGGGAGCTGCGGCTTCTAAAAAACAAGCTGAATTTAATGATTTTCTTGAGAGAAACCACATGTGCATATCAATGGAACTTGTAACTGCTGTTCTTGGTGATCATGGACAGCGTCCCCGAGAAGATTATGCGGTAGTTACAGCAGTTACTGAATTGGGCAATGGAAAGCCAAGGTTCTATTCAACTCCTGAAATAATTGCTTTCTGCAGAAAATGGCGCCTACCTACAAATCATGTGTGGCTGTTTTCAACAAGGAAATCAGCATCATCCTTCTTTGCTGCCTATGATGCTTTATGTGAGGAGGGTACTGCAACACCGGTATGCAAGGCTCTTGATGAAATTGCAGATATATCTGTACCAGGTTCAAAAGACCATATAAAGGCCCAAGGTGAAATTCTGGAGGGTCTCGTAGCTCGTCTTGTGAGTCATGATAGTCCAAATCATATGAAGAAAATTTTGAAAGAATACCCTTTTCCACCTGCTGATGGAGATGCCCTTGATTTGGGACCAAGTCTAAGGGAAATTTGTGCTGCAAATAGGTCTGATGAAAAACAGCAAATAAAAGCTCTTCTTGAGGGTGTTGGTAGTTCTTTTTGTCCCGACTACTCGGATTGGTTTGGGATCGGTGCTACTGATTCTCATTCAAGAAATGCAGACCGATCTGTTCTTTCAAAGTTTTTGCAAACCAATCCTGCAGACTATTCAACTAAAAAGTTGCAGGAAGTTGTCCGGTTGATGAGGGAAAAACGCTTCCCCGCTGCATTCAAATGTTATCATAACTTCCATAAAGTTGATGACATATCAAGTGACAATCTTTTCTACAAAATGGTCATTCATGTACACAGTGACTCAGCTTTCAGGAGATACCAGAAAGAAATGAGGCATAAACCTGGATTATGGCCACTATATCGAGGATTCTTTGTTGATATCAATTTATTCAAGGCAAACAAGGAGAGAACCACTGAAATTTCAAAGAATAATAGTACAAGTGAAAGTGCTAGTGATAGCTCTGAGAAAGAAGAATTAGCTGATGAAGATGCAAACTTAATGGTCAAATTGAAATTTCTTACGTATAAGTTGCGAACATTTCTCATTCGAAATGGCTTGTCAATTCTGTTTAAAGAAGGTCCAGGTGCTTACAAGGCTTATTACCTAAGACAAATGAAAATATGGGGAACCTCCCCAGGAAAGCAGAGAGAACTTAGCAAGATGCTTGATGAATGGGCTGTCTTTATAAGAAGGAAGTATGGAAATAAGCAACTATCATCATCAACTTATCTTAGTGAAGCTGAACCTTTCCTTGAACAATTCGGAAGACGAAGTCCTCTGAACCAGGCTCTAATAGGCTCTGCGGGTAATTTAGTTAGGACTGAAGATTTCTTGGCCATTGTTGAGGAAGGCCAGGACGAAGAAGGTGATCTTGCAGCAGAGCGGGAGTCAGTGTCACCTGGGCCTAGTATCCCAGTTCAAGACACGGTCCCAAAAGCTGATGGGCTGATTGTATTCTTTCCTGGAATACCTGGTTGTGCTAAGTCTGCCCTTTGCAAAGAATTGCTAAAGGCTAAAGAAGGATTAGGAGATGAGCGGCCAATGCATAGTCTCATGGGTGATATGATAAAAGGAAAATATTGGCAGAAAGTGGCTGAAGAACGCAGAAGGAAACCAAAGTCTATAATGCTTGCTGACAAGAATGCCCCAAATGAAGAAGTTTGGAGATTGATAGAAGACATGTGTCGCAGAACCAGGGCATCTGCTGTTCCCATTGTGCCGGATTCCGAAGGAACTGATACAAATCCATTTTCCCTTGATGCATTAGCTGTTTTCATGTTTCGTGTGCTTCAACGAGTCAATCATCCAGGAAATCTGGACAAGGCATCTCCAAATGCTGGCTATGTGCTTCTAATGTTTTATCACCTCTATGAGGGCAAGAGCCGTAAAGAATTTGAGAGTGAATTAATTGAGCGTTTTGGGTCGCTTGTCAAGATGCCACTGTTGAAGCCGGATAGGACTCCCCTTCCCGAGGCTTTGCACTCTGTCCTGGAGGAAGGAATTGATCTATATAAGCTTCACACTAAAAGACATGGAAGATTAGAATCTACCAAGGGGTCTTATGCACAGGAATGGACAAAATGGGAGAAACAACTACGAGACATCCTTTCTGGGAATGCTGACTATTTGAATTCAGTTCAGGTTCCGTTTGAGTTTGCTGTCCAGCAAGTTCAGGAAGAATTACAGAAGGTTGCCAAGGGTGATTACATACCGCCAGTTACCGAGGAGAGGAAACTTGGAACCATCATTTTTGCTGCCCTCAGTCTACCAGTTACAGAAATTCATGCTGTTCTTAACAATTTAGCCAAGAAGGATCCCAAGATTGAAGCTTTCCTTAAAGACAAGAAATTAGAGAATCTTAATCGTGCTCATTTGACTCTTGCCCACAAGAGAAGTCACGGCATCAAAGCTGTAGCTGACTATGGCCTTTTCCTGCATAAGAAGGTACCAGTGGAGCTTACAGCACTACTCTACTCTGATAAGATGGCTGCATTTGAAGCATTTCCGGGGTCAGTTGAAGGTGAGAAGATAGATTCCAAGAATGAGTGGCCTCATGTTACCGTATGGACTGCTGAAGGCGTTTCTGCCAAAGAGGCCAACATGTTGCCACATTTGCTTGCAGATGGGAAAGCAAATAGGATTGTCTTCAATCCTCCCATCAATATATCCAGCACAATGGAGTTCTTTTGA 3522 0.4367 MSAPQRLLCTLSSRTFLLLPFSHPYRTLASPPSPFSLIPMPRNQRRGQQWKEKPKREGELSAAAAAGGGAITSSASAGTVTNGLAGLRIAESGAAKTSVGAGVQDRKVIWKPKSYGTASGVATAEAEMAGKGAADADAAAAAAGAEAVVASPKTSGSPSLSKLFSGNLLEKFTVDNSTYSQAQIRATFYPKFENEKSDQEIRIRMIEMVAKGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMFREAWGAAASKKQAEFNDFLERNHMCISMELVTAVLGDHGQRPREDYAVVTAVTELGNGKPRFYSTPEIIAFCRKWRLPTNHVWLFSTRKSASSFFAAYDALCEEGTATPVCKALDEIADISVPGSKDHIKAQGEILEGLVARLVSHDSPNHMKKILKEYPFPPADGDALDLGPSLREICAANRSDEKQQIKALLEGVGSSFCPDYSDWFGIGATDSHSRNADRSVLSKFLQTNPADYSTKKLQEVVRLMREKRFPAAFKCYHNFHKVDDISSDNLFYKMVIHVHSDSAFRRYQKEMRHKPGLWPLYRGFFVDINLFKANKERTTEISKNNSTSESASDSSEKEELADEDANLMVKLKFLTYKLRTFLIRNGLSILFKEGPGAYKAYYLRQMKIWGTSPGKQRELSKMLDEWAVFIRRKYGNKQLSSSTYLSEAEPFLEQFGRRSPLNQALIGSAGNLVRTEDFLAIVEEGQDEEGDLAAERESVSPGPSIPVQDTVPKADGLIVFFPGIPGCAKSALCKELLKAKEGLGDERPMHSLMGDMIKGKYWQKVAEERRRKPKSIMLADKNAPNEEVWRLIEDMCRRTRASAVPIVPDSEGTDTNPFSLDALAVFMFRVLQRVNHPGNLDKASPNAGYVLLMFYHLYEGKSRKEFESELIERFGSLVKMPLLKPDRTPLPEALHSVLEEGIDLYKLHTKRHGRLESTKGSYAQEWTKWEKQLRDILSGNADYLNSVQVPFEFAVQQVQEELQKVAKGDYIPPVTEERKLGTIIFAALSLPVTEIHAVLNNLAKKDPKIEAFLKDKKLENLNRAHLTLAHKRSHGIKAVADYGLFLHKKVPVELTALLYSDKMAAFEAFPGSVEGEKIDSKNEWPHVTVWTAEGVSAKEANMLPHLLADGKANRIVFNPPINISSTMEFF* 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0378 1173 PANTHER TRNA LIGASE 1 106 1157 IPR038837 GO:0003972|GO:0006388
Ahy13g0378 1173 MobiDBLite consensus disorder prediction 32 53 - -
Ahy13g0378 1173 MobiDBLite consensus disorder prediction 582 601 - -
Ahy13g0378 1173 PANTHER TRNA LIGASE 1 106 1157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0378 Ahy-Chr13 3776208 3788558 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0378 - - aip:107629182 2236.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0378 13 3776208 3788558 Ahy13g0378 13 3776208 3788558 ECH