Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0377 ATGGCCGAGACATCCTCGGAGGAGGAGTTGAGTGTCGTGAACGACAACAACCATAAAAGTACAAATAATATCCCAATTGAGATCGTGAGTGATGAAGAAATGGCTCTCATTGAAGCTGCTTTTGCTTTAGCTTCTTCCTCTTCTGCTCGCTCTCTTTCTCTTTCTGCTTCCATTCGATCTTCTTCTTCTTCACCTTCTCCTCCTTCTCCCCTTCTTCACACCAACGCTCTTTCCATCAAATCAATCACTCTTCTCGCCAAGCGAAGGTTATCAACTGAAACTAGCAATGGCAATGGCAATGTTAACCACCCTGATATTGAAGACCTCTTGCCCAAGAAAACAAGGCTCCATGATTCATTTCTCCACCGATATAGAAGGAGCCGAGGCTTGTCCGTCACTGATCTCACTGCCGCGGAATGGTGCGAGAAACAGAAGGAATTCTCTCTTACCCGCGGTGGCCGGAGGACCACCAAGGCAATGAGAGCTGGTATTGCTAGACATGTGGAGCTTGAAGAAGAGGTTATGAAACGGGTGGCGGTGAAGATCGCCACAAAAGAAGACGGTTGGGCCCTGAAGTTTCTTAATTTTATTCATGGTGTGAATCAATTATTGTTTACAGGGTTAACTCGCGAACTGCCAATAATAGCATATATAGGCAATGTATGGATGGTGGGAGTGATTGATGAGATTCAGATGCCATTAACAAAAGAACATCATAATCCAATATTAATTGACACCAAAACTCGTGTTCGAGATACACTTCCTTCTGAAGCGCAACGAAGAAACGGAAGGTTTCAACTGATGTGTTACAAGTACTTGTGGGACAATACAATCGCCAATGATTTCCCTTCTGGAAAGTTTTTCACTTATTTTAGCTTAAACCCTCACCATATTCTTGCCGAAGATCTGCAAGTGACAATTGCTGGCTCCGATTTCTGTGTATCTGCAAGTGACAAGAATCTGACCCTTGATGATATGCTGAGATATTACACAAACACCTTGAAGATGCTAGCCCCTGCTCATGATCAGCTTCTGTTAAGATATGAGTATCAAGAAGATAAGTCATTGCTGGCGGAAGATAAATTTGAGTATGATTCTGAATGGTTAAAGAATCAGATTCAAAGTTGTCTTGAGTTTTGGCATGGACAACGAGAGGCAAGCTATGCACCTGAAGATGAGCGATGGAAATGTCGATACTGTCAATTCGCCAGAGACTGCGAAGGATATGCTGAGAGTATGACACCAAAGGAAGATTCAAATGATGATACCTGCGTCACTCACGGAGAAGACATTTCTTCTCAAATCAGCTCATAA 1314 0.4315 MAETSSEEELSVVNDNNHKSTNNIPIEIVSDEEMALIEAAFALASSSSARSLSLSASIRSSSSSPSPPSPLLHTNALSIKSITLLAKRRLSTETSNGNGNVNHPDIEDLLPKKTRLHDSFLHRYRRSRGLSVTDLTAAEWCEKQKEFSLTRGGRRTTKAMRAGIARHVELEEEVMKRVAVKIATKEDGWALKFLNFIHGVNQLLFTGLTRELPIIAYIGNVWMVGVIDEIQMPLTKEHHNPILIDTKTRVRDTLPSEAQRRNGRFQLMCYKYLWDNTIANDFPSGKFFTYFSLNPHHILAEDLQVTIAGSDFCVSASDKNLTLDDMLRYYTNTLKMLAPAHDQLLLRYEYQEDKSLLAEDKFEYDSEWLKNQIQSCLEFWHGQREASYAPEDERWKCRYCQFARDCEGYAESMTPKEDSNDDTCVTHGEDISSQISS* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0377 437 PANTHER EXONUCLEASE V 14 418 IPR019190 GO:0045145
Ahy13g0377 437 MobiDBLite consensus disorder prediction 1 22 - -
Ahy13g0377 437 Gene3D - 107 407 IPR011604 -
Ahy13g0377 437 MobiDBLite consensus disorder prediction 412 437 - -
Ahy13g0377 437 Pfam Exonuclease V - a 5' deoxyribonuclease 237 308 IPR019190 GO:0045145
Ahy13g0377 437 Pfam Exonuclease V - a 5' deoxyribonuclease 120 233 IPR019190 GO:0045145
Ahy13g0377 437 Pfam Exonuclease V - a 5' deoxyribonuclease 323 407 IPR019190 GO:0045145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0377 Ahy-Chr13 3772895 3776159 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0377 K17815 - gmx:100792136 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0377 13 3772895 3776159 Ahy13g0377 13 3772895 3776159 ECH