Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0323 ATGGCCGGCAAAGGCGGAAGCGCTCCGGCGACGTACTCGCCGTCTCCGACCACTCAGAAGAAGAAAACTTCCCTTTTCCAAGAAGATTGGGTCCGACCTGATGGCCGTGGCTTCCACCAGTGCAGACCTGCTTTTTTCAGGACTGGTGCTGTGAATGCTGCATCAGGATCAGCCTATGCGGAGTTTGGAAACACCAAGATCATTGTATCTGTATTCGGGCCTAGGGAGAGCAAGAAGGCAATGATGTACAGTGATATAGGGCGTTTAAATTGCAATGTTAGCTATACAACGTTTGCAAGTCCAGTTCGTGGACAGGGTTCAGACCACAAAGAATACACTGCAATGCTTCATAAAGCTTTGGAGGGTGCAATAATATTGGAATCTTTCCCCAAGACAACTGTGGATGTTTTTGCATTGGTGCTGGAATCTGGCGGCAGTGATCTCCCAGTTGTCATATCATGTGCTAGCCTTGCCCTGGCTGATGCTGGAATAATGATGTATGACCTCGTTGCATCAGTTTCTGTGTCCTGTCTCAGTAAGAATCTTGTCATTGATCCTATTTTTGAGGAGGAAAACTCCCAAGATGGAAGCTTGATGATTACGTGCATGCCTTCTCGCTATGAAATTACTCAACTTACATTTACTGGGGAATGGTCCACCCCAAAGATTGACGAGGGAATGCAGCTTTGCCTTGACGCTTGTGCAAAGCTTGCAAAGATTATGAGGTCATGTTTGAAAGAAGCTGCTTCTGATTCTCAGGAATAG 765 0.4667 MAGKGGSAPATYSPSPTTQKKKTSLFQEDWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKIIVSVFGPRESKKAMMYSDIGRLNCNVSYTTFASPVRGQGSDHKEYTAMLHKALEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVASVSVSCLSKNLVIDPIFEEENSQDGSLMITCMPSRYEITQLTFTGEWSTPKIDEGMQLCLDACAKLAKIMRSCLKEAASDSQE* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0323 254 MobiDBLite consensus disorder prediction 1 24 - -
Ahy13g0323 254 Pfam 3' exoribonuclease family, domain 1 40 164 IPR001247 -
Ahy13g0323 254 SUPERFAMILY Ribonuclease PH domain 2-like 166 251 IPR036345 -
Ahy13g0323 254 CDD RNase_PH_MTR3 41 247 - -
Ahy13g0323 254 SUPERFAMILY Ribosomal protein S5 domain 2-like 26 195 IPR020568 -
Ahy13g0323 254 MobiDBLite consensus disorder prediction 10 24 - -
Ahy13g0323 254 Gene3D - 18 253 IPR027408 -
Ahy13g0323 254 PANTHER EXOSOME COMPLEX COMPONENT MTR3 18 249 - -
Ahy13g0323 254 PANTHER EXOSOME COMPLEX COMPONENT 18 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0323 Ahy-Chr13 3269620 3272817 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0323 K12587 - gmx:100816271 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0323 13 3269620 3272817 Ahy13g0323 13 3269620 3272817 ECH