Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0289 ATGGCATCAAAAAGGTCTCTCATCACTCTTTGTTTGTTCTTGTTCTACTTATCATTAACATTTTGTTTGTGTTATGGAACAAGAACATTGTCCCCATTATCATCATCCACAAATGATGTTCTTCTTAGGATGCCCCCAGCAGAAAGGCTGATAAGAAGCTTCAATCTGTTTCCAAGAAAATCAGTAAACATAAGAAGAGGAAGTAGTGATGATGTGTTTGTCCCTGGAAAATTAGTGGAGAAGAAGTTCTCATTTCTTGCTGATTCTTCTGTTCAAGAATTAGGTCATCATGCCGGCTATTATTCTCTCCCTCGTACCAAAGCCGCAAGGATGTTCTATTTTTTCTTTGAATCTCGGAACAATAATAGCAAAGATGCCCCAGTTGTGATATGGTTGACTGGAGGACCAGGATGTGGCAGTGAACTTGCATTGTTCTATGAGAATGGTCCTTTCAAAATTACTAGTAACATGTCTCTTCTATGGAATGACTATGGTTGGGACAAGGTTTCAAACCTTATATATGTTGATCAACCAACTGGGACAGGATTCAGCTACAGTTCTGATGAGTCAGACCTTCGGCATGATGAAACGGGTGTTAGCAACGATCTTTACGATTTTTTACAGGCATTTTTCAAAGAGCATCCTCAGTTTGTTAAGAATGATTTTTATATTACCGGAGAATCATATGCTGGACACTATATTCCAGCTCTTGCATCTCGAATTCATCAAGCTAACAAACAAAAACAAGCAATTCTTATAAATCTAAAGGGTTTTGCAATTGGCAATGGATTAACCAATCCTGGGATTCAATATGCAGCATATACGGATTTTGCATTATCCAATAAATTAATTACAAAGAGTGATTACAACAACATCAACTCCAAGCTCCAAGGATGTGAACAAGAAATAAAAAACTGCGCAACTGAAGGTGGAGACCAGTGTGCCGCCGCTAAAGCCACATGCGACCAAATATTCCAAAGTATCCTTAGCGCTGCTGGCAACGTTAATTACTATGACATTAGAAAAAAATGTGAAGGAGCTTTGTGCTATGACTTCTCAAACGTGGATACACTCTTAAACGAGAAGTCAGTGAAGAAGGCTTTAGGAGTGGATGATGATTTGGACTATGTTTCATGCAGTGATGAAGTGTATTTTGCTATGGTTAATGACTTCATGGTCAATTTGGAAGTGCCTATTCCACCTCTTCTTGAAGATGGGATTAGGTTTCTTGCCTATGCTGGTGAAGAAGATCTCATTTGCAATTGGCTAGGTAATACACACTACTGCTTCCATTCCTCAAGTGATTTAATAATATAG 1317 0.385 MASKRSLITLCLFLFYLSLTFCLCYGTRTLSPLSSSTNDVLLRMPPAERLIRSFNLFPRKSVNIRRGSSDDVFVPGKLVEKKFSFLADSSVQELGHHAGYYSLPRTKAARMFYFFFESRNNNSKDAPVVIWLTGGPGCGSELALFYENGPFKITSNMSLLWNDYGWDKVSNLIYVDQPTGTGFSYSSDESDLRHDETGVSNDLYDFLQAFFKEHPQFVKNDFYITGESYAGHYIPALASRIHQANKQKQAILINLKGFAIGNGLTNPGIQYAAYTDFALSNKLITKSDYNNINSKLQGCEQEIKNCATEGGDQCAAAKATCDQIFQSILSAAGNVNYYDIRKKCEGALCYDFSNVDTLLNEKSVKKALGVDDDLDYVSCSDEVYFAMVNDFMVNLEVPIPPLLEDGIRFLAYAGEEDLICNWLGNTHYCFHSSSDLII* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0289 438 ProSitePatterns Serine carboxypeptidases, serine active site. 224 231 IPR018202 GO:0004185
Ahy13g0289 438 SUPERFAMILY alpha/beta-Hydrolases 95 428 IPR029058 -
Ahy13g0289 438 Gene3D alpha/beta hydrolase 77 430 IPR029058 -
Ahy13g0289 438 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 174 IPR001563 GO:0004185|GO:0006508
Ahy13g0289 438 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 185 IPR001563 GO:0004185|GO:0006508
Ahy13g0289 438 PRINTS Carboxypeptidase C serine protease (S10) family signature 210 235 IPR001563 GO:0004185|GO:0006508
Ahy13g0289 438 Coils Coil 289 309 - -
Ahy13g0289 438 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 39 428 - -
Ahy13g0289 438 Pfam Serine carboxypeptidase 94 427 IPR001563 GO:0004185|GO:0006508
Ahy13g0289 438 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 39 428 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0289 Ahy-Chr13 2912519 2916251 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0289 K16298 - gmx:100797295 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0289 13 2912519 2916251 Ahy13g0289 13 2912519 2916251 ECH
Ahy18g0530 18 5122488 5125606 Ahy13g0289 13 2912519 2916251 PCT
Ahy8g1338 8 29409416 29412714 Ahy13g0289 13 2912519 2916251 PCT