Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0288 ATGGCATCACCATCACCAACCCTCACCAAAATAATCTCTCACCCATTTTTCTTCTTTCTCTTCTTCTTTTCATGTTCTACTATTCTATCCTATGCAATAAGAACTTCTTCATCACCATCATCATCCATCAATAGTAATGATCTTCATCATCTCTCTCGAGCAGAGAGGCTCATAAGAAGCCTTAATCTGTTTCCAACAAAGCCAGTTAACATCATAGGAGGAGGAGGAAGTGGTGACGACGATGTGTTCGTGCCTGGAAAGATTGTTGAGAAGAACTTCTCATTTCTTTCTCTTTCTAATTCTGATCATCCTTCTATTCATGATCTTGGTCACCATGCTGGATATTATTCTCTTGTTCACACCAAAGCTGCAAGGATGTTCTATTTTTTCTTTGAATCTCGGAACAATAAGGATGACCCAGTTGTGATATGGTTGACTGGAGGACCAGGGTGTAGCAGTGAACTTGCATTGTTCTATGAAAATGGTCCGTTCACAATTACTCGTAACTACCTCTCACTTCTATGGAATGATTATGGTTGGGACAAGGCATCAAATATTCTATTTGTTGACCAACCCACTGGGACAGGTTTTAGTTACAGTTCTGATGACTCTGACATTCGCCATGATGAGAATGGTGTTAGCAATGATTTGTACGATTTCTTGCAGGCATTTTTCAAAGAGCACTCGGAGTTTGTGAATAATGATTTCTATATCACTGGAGAATCATATGCTGGACATTACATTCCAGCTTTTGCATCTCGAGTTCATCAAGGAAACAAAAATCAGGAAGGAATTCATATAAATTTAAAGGGTATTGCTATTGGTAATGGATTAACTAATCCTGGAATCCAATACAGAGCATACACTGATTATGCATTACACAATAAATTAATTACAAAAGATGATCATCAAACTATCAATAAGTTGGTCCCACCGTGTGAACAAGCCATTCAAACTTGCGCCAAGGAAGGTGAAAAAGCCTGTGTAACAGCCAAGGGTAAATGTGAAAGTATATTTGATAGCATCTTATCAATTACCGGAAATATTAACTACTATGACATCCGAAAAAAATGCTACGGGGAAATGTGCTATGATTTTTCGGACATGGAGAGATTTTTGAGAGAAGGAAAAGTGAGGGAAGCTTTAGGTGTTGGGAAGTTGGAGTTTGTTTCATGTAGTAGGAGAGTGTATGATGCTATGAATGGGGATTGGATGAAGAATTTGGAAGTTGATATTCCAAATCTTCTTGAAGATGGTATTAGATTGCTTGTGTATGCTGGTGAAAAAGATCTCATTTGCAATTGGCTTGGGAATTCAAGGTGGGTTCATGCCATGAAATGGTCAGGTCAAGAACAATTTAGAGCATCTCCTACAATCCAATTTGTGGTCAACGGTTCACATGCCGGTTCACTAAAAAGCTATGGCCCACTTGCTTTCCTTAAGGTAAATGAAGCAGGGCACATGGTGCCAATGGATCAACCAGAAGCTGCACTTGAAATGATCACAAGATGGATGAAAGGGATATTAACTGTCACAACCCAAACTCACTATGCCTCACATAATTAA 1566 0.3889 MASPSPTLTKIISHPFFFFLFFFSCSTILSYAIRTSSSPSSSINSNDLHHLSRAERLIRSLNLFPTKPVNIIGGGGSGDDDVFVPGKIVEKNFSFLSLSNSDHPSIHDLGHHAGYYSLVHTKAARMFYFFFESRNNKDDPVVIWLTGGPGCSSELALFYENGPFTITRNYLSLLWNDYGWDKASNILFVDQPTGTGFSYSSDDSDIRHDENGVSNDLYDFLQAFFKEHSEFVNNDFYITGESYAGHYIPAFASRVHQGNKNQEGIHINLKGIAIGNGLTNPGIQYRAYTDYALHNKLITKDDHQTINKLVPPCEQAIQTCAKEGEKACVTAKGKCESIFDSILSITGNINYYDIRKKCYGEMCYDFSDMERFLREGKVREALGVGKLEFVSCSRRVYDAMNGDWMKNLEVDIPNLLEDGIRLLVYAGEKDLICNWLGNSRWVHAMKWSGQEQFRASPTIQFVVNGSHAGSLKSYGPLAFLKVNEAGHMVPMDQPEAALEMITRWMKGILTVTTQTHYASHN* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0288 521 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 46 509 - -
Ahy13g0288 521 Pfam Serine carboxypeptidase 108 507 IPR001563 GO:0004185|GO:0006508
Ahy13g0288 521 Gene3D alpha/beta hydrolase 92 516 IPR029058 -
Ahy13g0288 521 ProSitePatterns Serine carboxypeptidases, serine active site. 238 245 IPR018202 GO:0004185
Ahy13g0288 521 SUPERFAMILY alpha/beta-Hydrolases 109 508 IPR029058 -
Ahy13g0288 521 PRINTS Carboxypeptidase C serine protease (S10) family signature 176 188 IPR001563 GO:0004185|GO:0006508
Ahy13g0288 521 PRINTS Carboxypeptidase C serine protease (S10) family signature 189 199 IPR001563 GO:0004185|GO:0006508
Ahy13g0288 521 PRINTS Carboxypeptidase C serine protease (S10) family signature 224 249 IPR001563 GO:0004185|GO:0006508
Ahy13g0288 521 PRINTS Carboxypeptidase C serine protease (S10) family signature 477 490 IPR001563 GO:0004185|GO:0006508
Ahy13g0288 521 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 46 509 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0288 Ahy-Chr13 2906784 2910970 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0288 K16298 - gmx:100785987 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0288 13 2906784 2910970 Ahy13g0288 13 2906784 2910970 ECH
Ahy13g0288 13 2906784 2910970 Ahy18g0530 18 5122488 5125606 PCT
Ahy13g0288 13 2906784 2910970 Ahy8g1338 8 29409416 29412714 PCT