Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0239 ATGGTGTGGTGTTGCAGAGACATGATGGGGGGATTCAATCACTATGTTGTTGTGAAGTTCAAGGATGGTGTAGCAGTTGAAGAACTCACTGAAGGGTTGGTGAAAATGGTCTCAGGGATTGAGCATGTTAAGTCCTTCCAATGGGGAAAAGATATCGGAGGACCTGATTTTCTGAGACAAGGCTTCACTCATGCTTTCTTGATGACTTTCAATGGGAAAGAGGAGTTTGATGCATTTCAGAGTCACCCAAATCATGTTGAGTTTTCCAAATTATTCTCACCTGCTGTTGAGAATATTTTAGTGCTGGATTTCCCACCTACCATTGTCAAAGCATAA 336 0.4196 MVWCCRDMMGGFNHYVVVKFKDGVAVEELTEGLVKMVSGIEHVKSFQWGKDIGGPDFLRQGFTHAFLMTFNGKEEFDAFQSHPNHVEFSKLFSPAVENILVLDFPPTIVKA* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0239 111 PANTHER EXPRESSED PROTEIN 9 111 - -
Ahy13g0239 111 Gene3D - 9 111 - -
Ahy13g0239 111 ProSiteProfiles Stress-response A/B barrel domain profile. 12 104 IPR013097 -
Ahy13g0239 111 SMART Dabb_2 12 106 IPR013097 -
Ahy13g0239 111 SUPERFAMILY Dimeric alpha+beta barrel 8 106 IPR011008 -
Ahy13g0239 111 Pfam Stress responsive A/B Barrel Domain 13 105 IPR013097 -
Ahy13g0239 111 PANTHER - 9 111 IPR044662 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0239 Ahy-Chr13 2454243 2455413 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0239 - - gmx:100306003 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0239 13 2454243 2455413 Ahy13g0239 13 2454243 2455413 ECH
Ahy18g0590 18 5868347 5869282 Ahy13g0239 13 2454243 2455413 PCT
Ahy8g1400 8 30164985 30165946 Ahy13g0239 13 2454243 2455413 PCT
Ahy13g0239 13 2454243 2455413 Ahy18g0590 18 5868347 5869282 PCT
Ahy13g0239 13 2454243 2455413 Ahy8g1400 8 30164985 30165946 PCT