Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0199 ATGGCGCCTAGAAAATCACCGCGCGAGCGCCAAATGCTGGTACTCGAGTCGGTCATCGCCCTCGTGTTCGTGCTGGTAGCCTGCGTCGAGCTCTGCGACGGCGCCACCGTCGTCGATGTCTACCGTCTCATTCAGTACGACATATCCGGCGCCCCCTTCGGATCTCGCCTCGCCGGACTCAATCACCACGCCACCTCCCTCCACTTCTCTCCGCACGCCGATCTCTCTCGCACAGTACTTCTCATTCCTCTTCGCGAGTTCAACATCTCCTTCGTCAAAGAAAACAAGCCTCTGGGGGGTTTGTTATTCTTGCTGCCACAGATATTCAATTTTGAAAATAAAGGTGAAGTGGGAAGTAACCATTTAGATGGAACTGAAGAGTTGCTGAAGAATGTGTTGGCTGAACTTGAACAGATACTTATACGTACCAACTTACCTTATCCTGTTTATTTTGCTTTTGAGGATGACAACATTAATGCTGTATTAGCTGATATCAAGAAGAGTGATATCACTGGTCAGCCAGCTACTGCAACTACTGGCGGATACAAATTTGTTGTTTCAGCTCTAGAACCAAAGAGTCTTGTCTCTCCATCCATTACCAACATTCAGGGGTGGTTGACAGGACTGAAGGCAGGTGATGATGCACATCAATTACCCACCATCGCAGTAGTGGCATCATATGACACCTTTGGAGCTGCTCCTGCATTATCAGTGGGAAGTGATAGTAATGGAAGTGGTGTTGTGGCTCTTCTTGAAGTAGCTAGGTTGTTTTCACTTTTGTATTCTAATCCAAAGACCAGAGGCCAATACAATCTGTTGTTTGGGCTAACATCTGGTGGGCCTTACAACTACAATGGAACCCGTAAGTGGCTTCGGAGCTTTGATCAACGATTGCGTGAAAGCATTGACTATGCTATTTGCATAGATAGTATTGGCTCCTGGGAGAATGAATTGTGGATTCATGTGTCTAAGCCTCCAGAAAATGCCTACATTAAGCAAATCATGGAAGATTTTTCAAGTGTTGCAGAAGAGTTAGGCTTTAATGTGAATTTGAAGCATAAGAAAATAAATATCTCAAATCCTCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGTTGAGAGTTACTGCTGCCACTCTTTCTGAACTTTCGGCTGCACCTGAACTGCTGGAAAAGACTGGTGGTTTGATTGACAGCAGGCATTTTGTAGATGAAAAGGCAATTATCAGAGGTGTGAAATTAGTTGCTGAGAGTCTTGCGCGGCATATTTACGGACATCAAGGAAAGAACATCCAAATCTTTGCAGACAATAGTAACTTGGCTGTAAATCCTTATTATATCCGATCATGGTTAGATGTTTTGTCCCAAACACCTCGAGTGGCACCATTTTTCTCGAAAGATGATCCTTTTGTCATGGCTCTGAAAAAGGAATTAGAAGATCATACAGATGAGGTCAATCTGCAACGCGAAGCTCTAGATGGGATGTTCACATTTTATGATTCTACTAGCGCAAAGCTGAACATATATCAGGTTGCCAGTGTCACATTTGACTTGTTATTGCTTCTAGTACTGGGGTCGTATTTAATTGTGCTGTTCAGTTTCTTGGTCATCACAACTAGGGGTCTTGATGATCTGATCAGTTTATTTCGGCGGCCTCCCTCACGAAAAGTGAAGACTGCATAA 1683 0.4427 MAPRKSPRERQMLVLESVIALVFVLVACVELCDGATVVDVYRLIQYDISGAPFGSRLAGLNHHATSLHFSPHADLSRTVLLIPLREFNISFVKENKPLGGLLFLLPQIFNFENKGEVGSNHLDGTEELLKNVLAELEQILIRTNLPYPVYFAFEDDNINAVLADIKKSDITGQPATATTGGYKFVVSALEPKSLVSPSITNIQGWLTGLKAGDDAHQLPTIAVVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLRSFDQRLRESIDYAICIDSIGSWENELWIHVSKPPENAYIKQIMEDFSSVAEELGFNVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLEKTGGLIDSRHFVDEKAIIRGVKLVAESLARHIYGHQGKNIQIFADNSNLAVNPYYIRSWLDVLSQTPRVAPFFSKDDPFVMALKKELEDHTDEVNLQREALDGMFTFYDSTSAKLNIYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISLFRRPPSRKVKTA* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0199 560 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Ahy13g0199 560 PANTHER NICALIN 11 559 IPR016574 GO:0009966|GO:0016020
Ahy13g0199 560 SUPERFAMILY Zn-dependent exopeptidases 193 418 - -
Ahy13g0199 560 CDD M28_nicalin_like 133 426 - -
Ahy13g0199 560 Gene3D Zn peptidases 146 410 - -
Ahy13g0199 560 PIRSF Nicalin 3 555 IPR016574 GO:0009966|GO:0016020
Ahy13g0199 560 ProSitePatterns EF-hand calcium-binding domain. 241 253 IPR018247 -
Ahy13g0199 560 Coils Coil 122 142 - -
Ahy13g0199 560 Pfam Nicastrin 220 358 - -
Ahy13g0199 560 PANTHER NICALIN 11 559 - -
Ahy13g0199 560 Coils Coil 471 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0199 Ahy-Chr13 2097132 2105563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0199 4 558 EF-hand Containing Proteins AT3G44330 72.598 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0199 - - gmx:100779713 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0199 13 2097132 2105563 Ahy13g0199 13 2097132 2105563 ECH