Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0006 ATGTTCATATATATTGAAAAGGTCCTAACTAAGCATGCAATATTTGTGAGAGAGAGAAAGATGAAGAATAAGTTGGTGGTGGCGGTGGTGAGTGTGATAGTAGTAGCAGCGAGCGTAGTGCTAGAAGGATGCGAGTGCAGGACAGTGCAATTCATATTTGGGGACTCACTGTCGGATGTTGGAAACAACAAGTACCTGTCCAAGAGCCTCGCTCAGGCTAGCTTGCCGTGGTACGGCATTGATTTCGGAAACGGGCTCCCGAATGGCAGGTTCTCCAATGGGCGCACTGTTGCCGATATCATTGGGGATCAAATGGGCCTTCCAAGGCCTCCTCCTTTCTTGGACCCATCCTTGACTGAAGATGATATTTTGCACAATGGCCTCAATTATGCTTCTGGAGGGGGCGGCATTTTGAATGACACAGGCACCTATTTTATTCAGAGGTTCTCTCTCTACAAGCAAATTGAGCTGTTCGAGGGGACACAAGAACTAATAAGAGAGAAAATCGGGAAAGAGGAGGCAGACAAGTTTTTCAAGGAAGCAAGGTATGTGGTTGCACTGGGCAGCAATGACTTCATAAACAACTACTTGATGCCCGTATACAGGGACTCATGGACTTACAATGATGACACCTTCATACAATACCTGATACAAACACTGAGAGGCCAACTCACGGCTCTGCACGCATTGGGTGCAAGGCAGCTGATGGTCTTTGGGCTGGGCCCAATGGGCTGCATCCCCCTTCAGAGGGTGCTTTCGTCCTCCGCCTCCGGGGGCTGCCAACACAGAACCAACACCCTGGCCCTTAGCTTCAACAAAGCTGCCGCCAAATTGATGGACGACTTGGGGAAACAACTTGCCAATTCAAGCTTCAGATTTGGAGATGCTTATGATGTTGTCAACGATGTCATTTCCAACCCAAACAAGTATGGTTTTGAAAACTCAGATTCACCTTGTTGCTCGTTTGGGAGGATACGACCCGCTCTCACCTGTTTACCAGCTTCAAGGCTCTGCAAAGACAGAAGCAAGTACGTATTCTGGGATGAGTACCACCCCACAGACAGTGCTAACCAGCTCATAGCCAATGAACTTATCAAAAAGTTCGGCTTCTTGCGTCTTAATCAATCTTCATCCTCCCCTTCCCCTTCCCCTTCCCCTGCTATTTGA 1167 0.4824 MFIYIEKVLTKHAIFVRERKMKNKLVVAVVSVIVVAASVVLEGCECRTVQFIFGDSLSDVGNNKYLSKSLAQASLPWYGIDFGNGLPNGRFSNGRTVADIIGDQMGLPRPPPFLDPSLTEDDILHNGLNYASGGGGILNDTGTYFIQRFSLYKQIELFEGTQELIREKIGKEEADKFFKEARYVVALGSNDFINNYLMPVYRDSWTYNDDTFIQYLIQTLRGQLTALHALGARQLMVFGLGPMGCIPLQRVLSSSASGGCQHRTNTLALSFNKAAAKLMDDLGKQLANSSFRFGDAYDVVNDVISNPNKYGFENSDSPCCSFGRIRPALTCLPASRLCKDRSKYVFWDEYHPTDSANQLIANELIKKFGFLRLNQSSSSPSPSPSPAI* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0006 388 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 25 380 - -
Ahy13g0006 388 CDD SGNH_plant_lipase_like 51 367 IPR035669 -
Ahy13g0006 388 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 25 380 - -
Ahy13g0006 388 Gene3D SGNH hydrolase 46 368 IPR036514 -
Ahy13g0006 388 SUPERFAMILY SGNH hydrolase 181 367 - -
Ahy13g0006 388 Pfam GDSL-like Lipase/Acylhydrolase 51 363 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0006 Ahy-Chr13 104418 106375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0006 51 364 Acyl Lipid Metabolism Gene Families AT4G10950 32.484 6.04e-61 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0006 - - adu:107463630 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0006 13 104418 106375 Ahy13g0006 13 104418 106375 ECH