Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g3046 ATGGGAACTGATTCCACTCTCGCCGGCAAGGAAGTCCCCATCATCGGAACCGACGTCTTTCGGTGGATCGAACTCTCCGTCCCTTCTTCCTCCTCCAACATCCCCACCGCCGTCGACGGCACCAACGCCACCACAATTGCTCCTCCCACCGTTGACGACCGCGCTTCCTGCTTCGTCCTCGAAGATCCTTCAGCTTATCTAATTTGGAGAATCCACAAGTTGCAGCCTCATGCTCTTGAGCTTCTTGAGCTCAATGCTTCGAAGGAATTACCCAAAGCCGGTCTCAGATTCATATTCCCTTACCAGCTTTGTCCATTTGCATTCGTCTGCAAAAATGAGATTAGTAGGAATTCTAGGTTTCCTTACTTGTTATATGTGTTGACTGTGACTGGGGTGGCCTATCTTTTGAAAATTCGGAATGTTTCGGCTTATGCATCGAGTGCCCTCTTCCCAGCAGAGGATCTTTTCGAGCTTAATGTGTGCGATTATGTTTCTAATCATGTGCCGATAACTGCTGTTACTGCAACGGCTGGGTGTGTTGTTGTTGGCAGAAGTGATGGTTCTGTGTGCTGTTTCCGCCTTGGCGTGATTGACACAAGTGCTCCTGGTTTTGTGCATGAGCTGAGAGATGAAGCTGGAGTCAGCCGTTTGTGGGGTTTGATGTCACGGGGTAAAATGGTGGGTGCTGTACAGGACATGGAAATATCTGAGTTACATGGGAAAAGGTTTGTGTTTGTGCTTCATTCAGATGGGACATTACGAATTTGGGATCTTTCATCTCATAGCAGGGTCTTTAATCATACCGTAACAGGTGCTACCTTTCGAAGGTTATGGGTGGGTCAATTTGACCCTGATTCAAGTACAATTCCTCTGTCAATTTTATACAAACACGGTTTGGATGAAGAGTTGGAGATGATTTCTTTACATAGTATCCGATATAATTTTGGGGAGAGAAATGTTTTTTCTATGGATCCTTCAGTGCAAAATATCACCTTGGAGGAGGGACAATGCCTTGACGTTAAAATAACACTGGATAAGATATGGATATTGAAAGATGATGAATTGGTTTCACACATGTTAACAACAAACGTTGAGGAGGTAGAAGCATTTTCTTATGCTTTACAAGAAGAAGTTGTTGCTGATCAGCTGTTTCAAAGTTCAGAACATCAAGCAGATGAAATCTTGCAAATTGCATGTTCAATATTTTCATCTTCAAAGGAGGATGTTGTGCCATTTATATCTTCTATATTCCTGCGCAAACTGCTTCTTCCTGGGGTGCATCATAATGCTGCTTTGCATGCAACACTTGCTGAATATAGCAGGCATTTGCCTGAATCTGACTTACAAGCATTAACTGCTGATGGACTAAAACAGGAGGTTCTGTCACTCATTGAACATGAGGTTGGTTCTGAAAAGCTGTCCATACTGCATTCTTGGAAATGTTTTCTGACCCGCTATTTCCACAATTGGTGCAAGAACAATGCAATATATGGCTTGCTTGTTGATTCTTCAACTGATGCTGTTGGTTTAATCAGAAAAAGTTCGGTTTCAATTTTTCGGTCTTTGGAAGATATTGAGCGGATTGTAGAAGGGTCTTCAGATGAAGTTGGTGAGCTCACAGGCCTTGTGGATTTACTTGATGATGATCTTGAATGTGAAATTCTGGTCGAATTACTTAGATGTGTTATGAGTTTCAGCCAACAGTTGGGCAAAACTGCATCCTCTATTTTTTATGAATCAGTTTTAACTGCACCAGTGATTTCATCTGAAGACATTGTTCACTGTATAGTGAAGATTCTGGAAACTGGATCTTGTATATCAGGGCCCAATGAGAAGGAGCTTATAGATCACAAAAGCTTGAGAAAACTTTCTGCTGAAATGTTCTTATCTCTTCAAAGCTTGTACAGAAAGGCTTCTGCATGGAGCAGAATTTTAAATGTAATTCAGGGTTTCTTGAAATTTTTGGTTCCACAGAAAATAATACAAAATTTTGATACTGAAGTGTCATCAAATATAAACTCCTCCATTATAGTGCATACTACTTATCAGATTTCGAAAGTGATGTTTGAATCTGCCTGGGATTTCCTTCTATTTTTAAGTTATCTGGTGGACATCGGTGGTCAGGTCCACTTGTCACATGATGATATCACCAAAATACAACTTGAGATAGTTCCAATGCTTCAAGAAATTATTTTTGAATGGCTAATCATCAACTTCTTTGCCATCACACCATCTGCACCAGCTACAACTGAGGACTTCAATTCTAAACTTTCATCATTACATATAGATTGCAACACGGGGAAACAATTATGGAATGAGAAGCTTGGTAGACGCGACTTTACATTGGCTTTTATATTGCTGCTAAATGTTAGAAGTTCATCAACAGACCATGGCCACCTTTTAAAAAGATTTCCAAATATGCAGAGCTTTGTTAACAGGATGAGAGACTTTATCAGTTGGATCATATGGGGCCAGTCTGGTGGATCATCTAATTTCCTGAGTCGTTCAATTGATCTTGCATTTATCCTTTTCAAGCATGGCCAGTATGAGGCTGCTGAGCAATTGCTGATGATGGCGGAAGCACATCTTCTAAAGGAGAAGACATCCCAAAGTATTCAAGAATCTGATGGTGGATGGTGCATACGCCAACATCTTCTAGGATGCTGCCTCCTTGCACAGGTGCAGTGTGGATTGCATACAACACAGAAGGACAACAAGGTTTTTGATGCCATTCGCTGTTTCTTCAGATCTTCATCTGGAAATGGTGCATCCGAGGCTTTGCAGAGTTTGTCTGAAGATGTCGGAATTCCGTATCTTGGTTTTAGTGGTTGTGCATCAACGGCTGCTTGGAAGCTTCAATACTATCAATGGGCTATGCAGTTATTTGAACGATATAGTATTAGTGAAGGTGCTTGCCAGTTTGCTCTTGCTGCACTTGAACAAGTTGATGAAGCTATGAAAGATGAGAATAACCCGGTTAATGGATCCATTACAACCACAAGGGGCCGACTATGGGCGAATGTCTTCATATTTGCATTAGACCTTGGTCGCTATTATGATGCTTATTGTGCAATAGTTTCAAATCCAGATGAGGAGAGCAAATACATCTGCTTGAGGCGTTTCATAATTGTTCTTTACGAACAAGGTGCTATAAAGATTCTTTGTAGCAATAAACTTCCCCTTATTGGGCTAGTGGAAAAGGTAGAGCAAGAGCTTGCTTGGAAGGCTGAACGATCAGATATTTCTGCAAAGCCAAACTTGTACAAGTTGCTCTATGCATTTCAAATGCATCAGCATAATTGGCGACGAGCAGCAAATTACATGTATATGTATTCAACTCGTTTGAGAACTGAAGCTGCTTCAAAAGATTACCAAGGCAGTTCATTGATGTTGCAAGAGAGGCTGAATGCACTCTCCGCTGCTATCAATTCACTACACCTTGTTCATCCTGCATATGCCTGGATTGATCCACCAGCTAATGGAAGTTCTCTTCTTGGTGAACATTACCCAAGTAAGAAAGCTAAAAGAATACCTGAAGATCATTCAGCTGATAATGATGCTGAGCCTGAAAGGTGGCAGTCTTGTATTGATGTTGAAAAACTCGAGAATGAGTTTGTGCTAACTTCAGCAGAGTATAAGCTATCGCTGGTAAATGTCAAGTGGACATTTTCTGGCAAAGATGGAGCCCTATCAGATTTGGCTGAACTTCTTGTCAACAATAATTTGTATGATATGGCCTTCACGATCCTTCTCAGATTTTTCAAGGGTTCAGCACTGAAGAGGGAATTGGAAAGAGTTTTATCTGCTATTTCATTGAGATGCTGTCTTGATAAAGTAGAATCTACTTGGGTTGAGGAACATGGCCAGTTAGTGACGTCTTCTAAGCTTGAGATGGTTGTCCATGGTTCACCTGTTACACATCACACAACTCCACAAACTGACGGTAGTAGTTGCTGGGCAACTCTGAAGATTTACCTTGAAAAATATAAGGAATTTCATGGGAGATTGCCTGTTATTGTTGCCGAAACTCTTCTACGTGCAGATCCTCAGATTGAATTGCCCCTTTGGCTGGTTCAGTTGTTCAAGGAGGGACAAAAGGAAAGGATGTCCGGTATGAGTGGCCGGGAGTCAAATCCTGCATCTTTATTTCAGCTTTATGTTAGCTATGGTCGATATACAGAAGCTACTAATCTTTTGCTCGAGTGCATACAATCGTTTGCTTCAGTGAGGCCAGCGGATATTATTAGAAGGAAAAGATCCTTTGCTGCTTGGTTCCCATACACGACAATCGAGCGCCTACTATACCAACTTGAGGAATTGACTAGAAAGGGTCACATGGTAGAACAATGCGACAAGCTCAAAAGGATGCTTCTCAGTTCTTTGCAAAACCATCTAAAGACACTAAAGGTGGACTCGGAAGATGCAATTTCTGTATCTTCATGA 4443 0.4146 MGTDSTLAGKEVPIIGTDVFRWIELSVPSSSSNIPTAVDGTNATTIAPPTVDDRASCFVLEDPSAYLIWRIHKLQPHALELLELNASKELPKAGLRFIFPYQLCPFAFVCKNEISRNSRFPYLLYVLTVTGVAYLLKIRNVSAYASSALFPAEDLFELNVCDYVSNHVPITAVTATAGCVVVGRSDGSVCCFRLGVIDTSAPGFVHELRDEAGVSRLWGLMSRGKMVGAVQDMEISELHGKRFVFVLHSDGTLRIWDLSSHSRVFNHTVTGATFRRLWVGQFDPDSSTIPLSILYKHGLDEELEMISLHSIRYNFGERNVFSMDPSVQNITLEEGQCLDVKITLDKIWILKDDELVSHMLTTNVEEVEAFSYALQEEVVADQLFQSSEHQADEILQIACSIFSSSKEDVVPFISSIFLRKLLLPGVHHNAALHATLAEYSRHLPESDLQALTADGLKQEVLSLIEHEVGSEKLSILHSWKCFLTRYFHNWCKNNAIYGLLVDSSTDAVGLIRKSSVSIFRSLEDIERIVEGSSDEVGELTGLVDLLDDDLECEILVELLRCVMSFSQQLGKTASSIFYESVLTAPVISSEDIVHCIVKILETGSCISGPNEKELIDHKSLRKLSAEMFLSLQSLYRKASAWSRILNVIQGFLKFLVPQKIIQNFDTEVSSNINSSIIVHTTYQISKVMFESAWDFLLFLSYLVDIGGQVHLSHDDITKIQLEIVPMLQEIIFEWLIINFFAITPSAPATTEDFNSKLSSLHIDCNTGKQLWNEKLGRRDFTLAFILLLNVRSSSTDHGHLLKRFPNMQSFVNRMRDFISWIIWGQSGGSSNFLSRSIDLAFILFKHGQYEAAEQLLMMAEAHLLKEKTSQSIQESDGGWCIRQHLLGCCLLAQVQCGLHTTQKDNKVFDAIRCFFRSSSGNGASEALQSLSEDVGIPYLGFSGCASTAAWKLQYYQWAMQLFERYSISEGACQFALAALEQVDEAMKDENNPVNGSITTTRGRLWANVFIFALDLGRYYDAYCAIVSNPDEESKYICLRRFIIVLYEQGAIKILCSNKLPLIGLVEKVEQELAWKAERSDISAKPNLYKLLYAFQMHQHNWRRAANYMYMYSTRLRTEAASKDYQGSSLMLQERLNALSAAINSLHLVHPAYAWIDPPANGSSLLGEHYPSKKAKRIPEDHSADNDAEPERWQSCIDVEKLENEFVLTSAEYKLSLVNVKWTFSGKDGALSDLAELLVNNNLYDMAFTILLRFFKGSALKRELERVLSAISLRCCLDKVESTWVEEHGQLVTSSKLEMVVHGSPVTHHTTPQTDGSSCWATLKIYLEKYKEFHGRLPVIVAETLLRADPQIELPLWLVQLFKEGQKERMSGMSGRESNPASLFQLYVSYGRYTEATNLLLECIQSFASVRPADIIRRKRSFAAWFPYTTIERLLYQLEELTRKGHMVEQCDKLKRMLLSSLQNHLKTLKVDSEDAISVSS* 1481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g3046 1480 SUPERFAMILY WD40 repeat-like 165 287 IPR036322 GO:0005515
Ahy12g3046 1480 Pfam Family of unknown function (DUF5311) 543 723 IPR035192 -
Ahy12g3046 1480 Pfam Nucleoporin Nup120/160 67 528 - -
Ahy12g3046 1480 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP160 5 1465 IPR021717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g3046 Ahy-Chr12 120001532 120012217 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g3046 - K14303 gmx:100807578 2326.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g3046 12 120001532 120012217 Ahy2g2631 2 102403607 102414292 hybridization