Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g3033 ATGGATGATAATAATGGAGAAGCAAAGAGAATGGAAGAAGGTTTGAATGGCTCTATTGTTATTGATCATGATGAAAAGGACAAAACGGTCATTTCTCATGAGAAAGATCAAGGAACAATGAAACAGAAAACAAAGAGAATCGCAACACTTGATGCATTTAGAGGTTTCACTATCGTGGTGATGATATTGGTTGATGATGCTGGTGGGGCTTATCCAGAAATTGATCACTCACCTTGGAATGGATGCACATTGGCTGATTTTGTTATGCCTTTCTTTCTTTTCATTGTTGGAGTTGCCATAGCTCTTGCTTTCAAGAGAGTCCCTAAGGTTAAATATGCTGTGAAGAAGATATTCATTAGAACATTGAAACTTCTCTTCTGGGGTATACTTTTGCAAGGTGGATACTCTCATGCCCCTGATGACCTTTCATATGGGGTTGACATGAAATTTATTAGATGGTGTGGCATTCTTCAGAGAATAGGCCTTGTATTCTGTGTTGTTGCTCTAATAGAGACATTTAGTTCCAAGATTAGACCAACCACCCTAAATCCTGGACATCTATCCATTTTTACTGCCTATAGATGGCAATGGTTTGGAGGATTTGTTGCATTTCTGATTTACATGGTCACAACATTCAGCCTCTATGTTCCAAATTGGAGTTTTGTGGACTATAATGAGGAAAACCCAAAGAGACATACAGTAATATGTGGCATGAGAGGAGACTTAGGAGCAGCATGTAATGCAGTTGGCTATGTGGACAGACAAGTTTGGGGGATTAACCATCTTTACTCTCACCCTGTTTGGTCACGCTTGAAGGCATGCACATTAAGTTCTCCAAGTGAGGGGCATTTTCGTAAAGATGCTCCAACTTGGTGTCGTGCTCCCTTTGAACCTGAGGGCCTGTTGAGTTCCATATCAGCTATCCTGTCTGGCACCATTGGCGTCCACTATGGTCATGTCTTGATTCACTTCAAGAGGCATTCAGAGAGGTTAAAGCAATGGATCTCAATGGGGTTTGTGTTACTAATCCTTGGCATCATCCTTCATTTAACACATGCTATCCCAATCAACAAGCAACTATACAGCTTCAGCTATGTTTGTTTCACAGCTGGGGCAGCAGGAATTGTATCCTCTGCATTCTACATACTGATTGATGTTTGGGGATTTAGAACGCCATTCTTGTTCTTGGAATGGATAGGAATGAATGCAATGCTTGTGTTTGTTATGGCTGCTCAGAGCATCTTCCCAGGCTTTGTTAATGGATGGTATTTTAAGGATCAAGATAACACACTAGTAAATTGGATCCAAGAGCATGTGTTTAACAATGTTTGGCACTCAGAGAGATTGGGTACTCTATTATATGTCATCTTTGCTGAAATCACTTTCTGGGGTTTGGTTGCTGGCATCTTCCACAAATTAGGAATATATTGGAAACTCTAG 1440 0.4056 MDDNNGEAKRMEEGLNGSIVIDHDEKDKTVISHEKDQGTMKQKTKRIATLDAFRGFTIVVMILVDDAGGAYPEIDHSPWNGCTLADFVMPFFLFIVGVAIALAFKRVPKVKYAVKKIFIRTLKLLFWGILLQGGYSHAPDDLSYGVDMKFIRWCGILQRIGLVFCVVALIETFSSKIRPTTLNPGHLSIFTAYRWQWFGGFVAFLIYMVTTFSLYVPNWSFVDYNEENPKRHTVICGMRGDLGAACNAVGYVDRQVWGINHLYSHPVWSRLKACTLSSPSEGHFRKDAPTWCRAPFEPEGLLSSISAILSGTIGVHYGHVLIHFKRHSERLKQWISMGFVLLILGIILHLTHAIPINKQLYSFSYVCFTAGAAGIVSSAFYILIDVWGFRTPFLFLEWIGMNAMLVFVMAAQSIFPGFVNGWYFKDQDNTLVNWIQEHVFNNVWHSERLGTLLYVIFAEITFWGLVAGIFHKLGIYWKL* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g3033 479 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 46 175 IPR012429 -
Ahy12g3033 479 PANTHER HEPARAN-ALPHA-GLUCOSAMINIDE N-ACETYLTRANSFERASE-LIKE PROTEIN 4 479 - -
Ahy12g3033 479 PANTHER LD22376P 4 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g3033 Ahy-Chr12 119866952 119872844 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g3033 K10532 - gmx:100809725 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g3033 12 119866952 119872844 Ahy12g3033 12 119866952 119872844 ECH
Ahy12g3033 12 119866952 119872844 Ahy2g2618 2 102269027 102274919 hybridization
Ahy12g3033 12 119866952 119872844 Ahy6g1504 6 44440812 44453058 PCT