Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2996 ATGGGTTTTTGTTATTGGTGTGGTTCTTCATCATTGAAGCCATTGTTGTTGATGGTTGTTCCTCTTGTAATGGTTATGGCACTTACTTTTGCTTTTCTGAATGGTCCAAGTAGTAACAATAATAATACCTTGGTGCCACTACTTTGGAGCTCTATAACTCCTTCTTCTTCTCCTTCTTCTTCTTCTTTATTCATCAACAATGGTGATGATAACAAAACTATGCATGCCTTTGATGATCATCACATGTCTTTCTTCAATAACCTCTCTTACTTCTCTCCTCCAGCACTTTCTCTTCCGGAACAATATAACCAAACTGAGGTAGTTGATCATGACATCTCAAAAACTTGGGCAAGTTCAGCTCCTTTGAATGAATCTTATGTTGTTCCCCAAAGAAAATTCAGCATCTTAGATAGAACTGAAGCAGGTTTGCTACAAGCTAGAGCTGCTATTAGAGATGCAAGAAATTGGAATCAAACACTTGATCAAGACTATGTTCCAATAGGTCCAGTCTATAGGAATGCCAAAGCATTTCACAGGAGCTATTTAGAAATGGAGAAACAATTCAAAGTATTTGTCTATAAAGAAGGGGAGCCTCCAATTTTTCATAATGGACCATGCAAAAGCATATACTCAATGGAGGGTAATTTCATCCATGCTATTGAGATGAATGAGCAATTTCGAACAAGGGATCCTAAGAAAGCTCATGTGTTCTTCCTTCCCTTCAGTGTAGTAATGATGGTCCGATTTGTGTACGAGAGGAACTCGCGCGATTTCGGCCCCATAAGAACAACCGTCAAGGATTATATCAATCTCATTGCTGGAAGATATCCTTATTGGAATCGAAGCCTTGGTGCTGATCATTTCATGCTTTCTTGCCATGATTGGGGGCCAGAGACTTCATTCTCTATTCCTTACTTATACAAGAACTCTATACGTGTATTGTGCAATGCCAACACCTCTGAAGGATTCAACCCTACAAAAGATGTTTCTCTTCCTGAAATCAATCTCCAAACAGGTACAATAGATGGTTTTCTTGGTGGGCCTTCCGCATCTAAACGCTCAATTTTGGCCTTCTTCGCCGGTGGGGTTCATGGGCCCATTAGGCCCATTTTACTTGAGCAATGGGAGAACAAGGATGAAGATATCAAAGTCCACAAGTACCTTCCAAAGGGGGTTTCCTACTATGGTATGCTTAGAAAGAGCAAGTTTTGTCTTTGCCCTAGTGGGTATGAGGTGGCAAGCCCAAGGGTAGTTGAGGCAATTTACACAGGTTGTGTTCCTGTGCTTATTTCTGACCACTATGTCCCTCCATTTAGTGATGTCTTGAATTGGAAGTCTTTTTCAGTTGAAGTTTCTTCAAGAGACATTCCAAAATTGAAGGAGATTCTAACAAACATCTCATCAAGACAATATATAAGGATGCAACGGAGAGTGGACAACATTAGGAGACACTTTGAAGTGCATTATCCTCCTAAAAGATTTGATGTCTTCCATATGATACTTCATTCAGTTTGGCTTAGGAGATTAAACATTAGAATTTATGATGATTAA 1551 0.3959 MGFCYWCGSSSLKPLLLMVVPLVMVMALTFAFLNGPSSNNNNTLVPLLWSSITPSSSPSSSSLFINNGDDNKTMHAFDDHHMSFFNNLSYFSPPALSLPEQYNQTEVVDHDISKTWASSAPLNESYVVPQRKFSILDRTEAGLLQARAAIRDARNWNQTLDQDYVPIGPVYRNAKAFHRSYLEMEKQFKVFVYKEGEPPIFHNGPCKSIYSMEGNFIHAIEMNEQFRTRDPKKAHVFFLPFSVVMMVRFVYERNSRDFGPIRTTVKDYINLIAGRYPYWNRSLGADHFMLSCHDWGPETSFSIPYLYKNSIRVLCNANTSEGFNPTKDVSLPEINLQTGTIDGFLGGPSASKRSILAFFAGGVHGPIRPILLEQWENKDEDIKVHKYLPKGVSYYGMLRKSKFCLCPSGYEVASPRVVEAIYTGCVPVLISDHYVPPFSDVLNWKSFSVEVSSRDIPKLKEILTNISSRQYIRMQRRVDNIRRHFEVHYPPKRFDVFHMILHSVWLRRLNIRIYDD* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2996 516 Pfam Exostosin family 185 465 IPR040911 -
Ahy12g2996 516 PANTHER EXOSTOSIN FAMILY PROTEIN 92 514 - -
Ahy12g2996 516 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 92 514 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2996 Ahy-Chr12 119571130 119575443 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2996 - - aip:107626430 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2996 12 119571130 119575443 Ahy12g2996 12 119571130 119575443 ECH
Ahy12g2996 12 119571130 119575443 Ahy2g2581 2 101973205 101977518 hybridization
Ahy16g1741 16 70880275 70884072 Ahy12g2996 12 119571130 119575443 PCT
Ahy12g2996 12 119571130 119575443 Ahy16g1741 16 70880275 70884072 PCT