Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2581 ATGGATAGAGTTAAGGATTTGGCATCAAAGAAGGCAGCAGTAATATTCACAAAGAGTTCATGTTGCATGTGCCATAGCATCACACAATTGTTCTATGAGCTTGGAGCAAGCCCTGCAGTTCATGAGCTTGACAATGATCCCTATGGAAGGCAAATGGAATGGGCCTTGAGAAGCTTGGGATGCAACCCTTCAGTCCCAGCAGTCTTCATTGGTGGAAAATTTGTAGGCTCTTCAAAAGATGTTATATCCCTCCATGTTGATGGTTCCCTCAAACAATTGCTCATGGATGCTAAAGCCATATGGTTTTAG 309 0.4304 MDRVKDLASKKAAVIFTKSSCCMCHSITQLFYELGASPAVHELDNDPYGRQMEWALRSLGCNPSVPAVFIGGKFVGSSKDVISLHVDGSLKQLLMDAKAIWF* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2581 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Ahy12g2581 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Ahy12g2581 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Ahy12g2581 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Ahy12g2581 102 Gene3D Glutaredoxin 1 101 - -
Ahy12g2581 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 101 IPR011905 -
Ahy12g2581 102 Pfam Glutaredoxin 14 75 IPR002109 -
Ahy12g2581 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Ahy12g2581 102 PANTHER GLUTAREDOXIN-C1 PROTEIN 1 101 - -
Ahy12g2581 102 CDD GRX_GRXh_1_2_like 12 93 - -
Ahy12g2581 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2581 Ahy-Chr12 115183534 115184350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2581 1 102 Miscellaneous Gene Families AT4G15690 47.059 2.63e-34 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2581 K03676 - gmx:100819447 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2581 12 115183534 115184350 Ahy12g2581 12 115183534 115184350 ECH
Ahy12g2581 12 115183534 115184350 Ahy2g2238 2 98400921 98401904 hybridization
Ahy6g0723 6 8900854 8901244 Ahy12g2581 12 115183534 115184350 PCT
Ahy12g2581 12 115183534 115184350 Ahy16g0581 16 11053642 11054883 PCT
Ahy12g2581 12 115183534 115184350 Ahy6g0716 6 8728551 8729695 PCT