Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2569 ATGAGTGAAATTATGAAGAATCAAGGTTCACAATGGTGGTGGCTTGACACACACACCATCACTAGAAGATCTCAATGGCTTCAATCCACACTCAATGAACTGAATAAGAAGACACAGGCAATGCTCAAATTAATTGAACAAGATGCAGATTCATTCGCGCAACGCGCAGAGATGTATTACAAGAAGAGGCCAGAGCTTTTAAGCCTTGTTGAAGATTTCTATAAAGCACATCGCTTGTTAGCCGAGCGGTACGATCAGGTCAGGCCGGACACTGGAGCTCGGCTACTGAAGGTTGGAGGGTCGCCTTTTGCTTCTCCAAGTTGTAAATTACAGAAGGCAGTGAGTTTTGCAGATAGTGGTTATGATGATAGCAATTCCGAGAGTTGTGATGTAGAGGACGAGTTTATGGAATCCGAAGTTGATGATCCTGAGCACGAGGATGATGTTCGTTCTGTGGCATCAAGCGATAAAGTGATGATGAAGATAAAGAAAGAAATTCAGAACAAGGGTGATAAGGATCAAATCAAGAAGAAAGATTCCATTTGTGAAGAAATTGTGATGTTGAAGGAAGAAATCGAAAGACTCAAGGAAGAGAATAAAGCACAGAAGGATCAAATTAGACAGAAAGATATAATCTGTGGTGAAGTAATGATGTTGAGGAAAGAAAACGAAAGATTCAGAGAAGAGAATCGAGTGCAGAAGGAAGAACTAAAGCAGAAAGGTAACTTGGTGTGCAAGGAAAAGATTGAGAGACTTGAAGAAGAGAATAGAGAACTTGTGGAGAAGCTTAAGCTGAAAGTTCCTGCCTGTGTTGAATTAATAGAGTTGAGAAAAGAAATTAGAAAATTAAAAGAAGAGAATAGAGCAAAGGAGGATCAAATCAACCAGAAAGATTCCGTTTGTGCTGAAATAACGGTGTTGAGGAAAGAAATACAAATTCTCAGAGAAGAGAATAGATCAAAGGAAGATCAACTGAAGCAGAAAGATAGCTTTCTTGACGAACTAATGGTGTTGAGTAAAGGATTTGGAGAAGAGAATCGGTTGTTGAAGGAAAAACTCGAGCTGAAAGATGCTATGTCTGATGAAGTTATGGTGTTGAGGAAAGAAATAGAAAGACTCAGAGAAGATAATAGAGAAAAGGAGGATCAACTCAAGCAGAAAAGTAGCATTTGTGATGAAGTAATGGTTTTGCAGAAAGAAATTGAAGGGCTCAGAGAAGAGAATAGAACAAAACAGGATCAGCTGAAGTACAAAGATGCAATTTGTATCAAAATAATGACTTTGAGTGAAGAAACAGAGAAACTCAGAGTAGAGAATATAGCTCTGAAGGATCTGCTAAAGAAGAAAGATAACATCTATGATGAAGTATCAGTGATGCTGAGGGAAGAAATTGAAGAACTTCAAATAGAGAATAAGACACAAAAGGCTCATTTGAAGCAGAAAGATGAAGAGAAGATGGGAGTGATTAGGCACCTAAGTTTAGCAATAGATTTGCTTAAGCAAGAGAATGTGAAGATGAGAAGCTTCATTTCCAAGGAACTTGAAAAGAAATGGAACAACCCTTTTAATAAATTGTTCAATAGAGCCTCTAAGAATCAAACTAGTGTTATGCCAGTTTAG 1620 0.3809 MSEIMKNQGSQWWWLDTHTITRRSQWLQSTLNELNKKTQAMLKLIEQDADSFAQRAEMYYKKRPELLSLVEDFYKAHRLLAERYDQVRPDTGARLLKVGGSPFASPSCKLQKAVSFADSGYDDSNSESCDVEDEFMESEVDDPEHEDDVRSVASSDKVMMKIKKEIQNKGDKDQIKKKDSICEEIVMLKEEIERLKEENKAQKDQIRQKDIICGEVMMLRKENERFREENRVQKEELKQKGNLVCKEKIERLEEENRELVEKLKLKVPACVELIELRKEIRKLKEENRAKEDQINQKDSVCAEITVLRKEIQILREENRSKEDQLKQKDSFLDELMVLSKGFGEENRLLKEKLELKDAMSDEVMVLRKEIERLREDNREKEDQLKQKSSICDEVMVLQKEIEGLREENRTKQDQLKYKDAICIKIMTLSEETEKLRVENIALKDLLKKKDNIYDEVSVMLREEIEELQIENKTQKAHLKQKDEEKMGVIRHLSLAIDLLKQENVKMRSFISKELEKKWNNPFNKLFNRASKNQTSVMPV* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2569 539 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 91 IPR011684 GO:0003779
Ahy12g2569 539 Coils Coil 356 414 - -
Ahy12g2569 539 Coils Coil 178 212 - -
Ahy12g2569 539 Coils Coil 216 236 - -
Ahy12g2569 539 Coils Coil 242 266 - -
Ahy12g2569 539 PANTHER PROTEIN NETWORKED 3A-RELATED 428 534 - -
Ahy12g2569 539 PANTHER PROTEIN NETWORKED 3A-RELATED 10 286 - -
Ahy12g2569 539 Coils Coil 273 324 - -
Ahy12g2569 539 Coils Coil 457 484 - -
Ahy12g2569 539 Pfam KIP1-like protein 12 85 IPR011684 GO:0003779
Ahy12g2569 539 PANTHER PROTEIN NETWORKED 4A 428 534 - -
Ahy12g2569 539 PANTHER PROTEIN NETWORKED 4A 10 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2569 Ahy-Chr12 115023990 115028283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2569 - - adu:107475911 984.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2569 12 115023990 115028283 Ahy12g2569 12 115023990 115028283 ECH
Ahy12g2569 12 115023990 115028283 Ahy2g2231 2 98273500 98276213 hybridization
Ahy16g0564 16 10789138 10791846 Ahy12g2569 12 115023990 115028283 PCT
Ahy6g0734 6 9019393 9022061 Ahy12g2569 12 115023990 115028283 PCT
Ahy12g2569 12 115023990 115028283 Ahy16g0564 16 10789138 10791846 PCT
Ahy12g2569 12 115023990 115028283 Ahy6g0734 6 9019393 9022061 PCT