Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2542 ATGAATTTCTTCAAATCGGTATTCTCCGACGATCCTGATCCCAATCCTAATCCCTCGCCACCACAACCCTCCCCTTCCTCCTCCGCCACCACCACCGGCGCGTGGAAATTCGGCGACCTGATCAAAACCCTAAGTTCTAAATCTGAATCGATAATCGAAACCTACCGCCGCGACCTGCACGAATTCGGAACCGGACTGAAGAAGGAGATCGAGGTAGCTCACGGTTCCGTTGGCCACGTCATCGACGAGCTCGGAACCACCGTGGCGAAAGGAACGTCTCAGATCATATCCAAAAGCAAGGACGCGATCCGAGCCGTTGATAACCAATCCGATTATTCGGATCAGAAGAGAAGTGGACGCTTCTTCAGTAGACTTGATGCTGCGGTTCGTGATATTCAGGGTGATGCTGGAACTTACTGTGATGAACCTGAGGATTTGCAAGAGTTCAACGAGTGGAAATTAGGGTTTTCCATTGATGCGAAGAATGAAGAAATGGAGAGGCTTTTGAAGGAGAATGAGGCAATGGAAGGTGTTTATAAGAGTGTTGTTCCCAAAATTGTTGATCATGATGTGTTTTGGTTAAGGTATTATTATAAAGTTTCTAGATTGAAGAAAGATGAGGATGATGTTAGGGCTAGAATTGTGAAGGGGATGAACAAAGAAGAAGAGGATTTGAGTTGGGAAGTTGATGATGATGATGATGATAATGGTAATGGTAATGGTAATAATACTGATGGGGTTGAAGCTAAACAAGAGGGTAGTGTTGGTGGTGGTGAAAGTGTAGATGAAAGAGGAAGAACGAGATTGAATATGGAAGAGGTAAAGAGTTCAGGTGAGGAAGGATTGAAGACAGAGAAAAGAGAGAATTTGTTGGAAAGTAAGGAACTTGGCAAAAGGGTAGATGAGTTTGTTGAGGGATCCGGATCCGGAGGTGTTTGGAAGGTGGGTAGCGGCGATGGTGGAGTGAAGGAAACTATTGAGGAAGGAAATGTTGATGGTGTGCCAAAGTTTGAAGTGGACAATGCTGGAAGTAATAAGATTGATGAGAAAATGGTAATGGAAAGGAAGAAGGTTGATGATGTGAAATCTACAGATAAGAATGATGGAAGTAAGCACTTGTTTCATCAGGAGGAAGAAGAGGAAGAGGAACTTGGTTGGGATGAGATTGAGGATCTTAGTAGCATTGATGAAAAGAAAATAACTCAGAGTGGTAGTACAAGCATTAGTAAGATCGATTTGCGGAAGCGACTTAGTGCTGCAGAAGAAGAGGAGGAATTGAGTTGGGACATTGAAGAAGATGAGGAGCCTGCTGCTAGTGCTAAGGCCTGA 1329 0.4417 MNFFKSVFSDDPDPNPNPSPPQPSPSSSATTTGAWKFGDLIKTLSSKSESIIETYRRDLHEFGTGLKKEIEVAHGSVGHVIDELGTTVAKGTSQIISKSKDAIRAVDNQSDYSDQKRSGRFFSRLDAAVRDIQGDAGTYCDEPEDLQEFNEWKLGFSIDAKNEEMERLLKENEAMEGVYKSVVPKIVDHDVFWLRYYYKVSRLKKDEDDVRARIVKGMNKEEEDLSWEVDDDDDDNGNGNGNNTDGVEAKQEGSVGGGESVDERGRTRLNMEEVKSSGEEGLKTEKRENLLESKELGKRVDEFVEGSGSGGVWKVGSGDGGVKETIEEGNVDGVPKFEVDNAGSNKIDEKMVMERKKVDDVKSTDKNDGSKHLFHQEEEEEEELGWDEIEDLSSIDEKKITQSGSTSISKIDLRKRLSAAEEEEELSWDIEEDEEPAASAKA* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2542 442 Pfam BSD domain 152 208 IPR005607 -
Ahy12g2542 442 Gene3D BSD domain 117 213 IPR035925 -
Ahy12g2542 442 Coils Coil 158 178 - -
Ahy12g2542 442 PANTHER PROTEIN, PUTATIVE-RELATED 76 434 - -
Ahy12g2542 442 MobiDBLite consensus disorder prediction 421 442 - -
Ahy12g2542 442 PANTHER SYNAPSE-ASSOCIATED PROTEIN 1 72 - -
Ahy12g2542 442 MobiDBLite consensus disorder prediction 398 412 - -
Ahy12g2542 442 PANTHER PROTEIN, PUTATIVE-RELATED 1 72 - -
Ahy12g2542 442 MobiDBLite consensus disorder prediction 302 387 - -
Ahy12g2542 442 MobiDBLite consensus disorder prediction 257 289 - -
Ahy12g2542 442 SMART wurzfinal6 152 204 IPR005607 -
Ahy12g2542 442 MobiDBLite consensus disorder prediction 224 238 - -
Ahy12g2542 442 MobiDBLite consensus disorder prediction 397 416 - -
Ahy12g2542 442 SUPERFAMILY BSD domain-like 122 207 IPR035925 -
Ahy12g2542 442 MobiDBLite consensus disorder prediction 1 32 - -
Ahy12g2542 442 PANTHER SYNAPSE-ASSOCIATED PROTEIN 76 434 - -
Ahy12g2542 442 ProSiteProfiles BSD domain profile. 152 204 IPR005607 -
Ahy12g2542 442 MobiDBLite consensus disorder prediction 342 379 - -
Ahy12g2542 442 MobiDBLite consensus disorder prediction 221 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2542 Ahy-Chr12 114538661 114540180 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2542 - - adu:107475797 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2542 12 114538661 114540180 Ahy12g2542 12 114538661 114540180 ECH
Ahy12g2542 12 114538661 114540180 Ahy2g2204 2 97904521 97906125 hybridization
Ahy16g0277 16 6150255 6152015 Ahy12g2542 12 114538661 114540180 PCT
Ahy6g1048 6 13904924 13906747 Ahy12g2542 12 114538661 114540180 PCT
Ahy12g2542 12 114538661 114540180 Ahy16g0277 16 6150255 6152015 PCT
Ahy12g2542 12 114538661 114540180 Ahy6g1048 6 13904924 13906747 PCT