Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2468 ATGTCTTTGAACTCCAGAAAGGGAAACGCCACAGCTGAAGAAGCTTCATGGTACTGTGCTCTTCTCCTTCTTTCTTCCACTCTCCTCATCATGCTAACCATCTTCACTGATGAACACAATAGCAGCACTATTATTACTCTCCGACGACCCTGCGAGGAGATCTATGTGGTCGGAGAAGGGGAGACACTTCACACCATAAGTGACAAGTGCGGTGATCCTTATATCGTTGACAACAACCCTCATATCCATGACCCTGATGATGTCTTCCCTGGCCTTGTCATCAAGATCACACCTTCTTCTTCTTCACAATAA 312 0.4583 MSLNSRKGNATAEEASWYCALLLLSSTLLIMLTIFTDEHNSSTIITLRRPCEEIYVVGEGETLHTISDKCGDPYIVDNNPHIHDPDDVFPGLVIKITPSSSSQ* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2468 103 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN PROTEIN 8 100 - -
Ahy12g2468 103 Gene3D LysM domain 44 103 IPR036779 -
Ahy12g2468 103 CDD LysM 54 96 IPR018392 -
Ahy12g2468 103 PANTHER EMBRYO SAC 1 8 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2468 Ahy-Chr12 113446615 113446926 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2468 - - gmx:100815990 125.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2468 12 113446615 113446926 Ahy2g2134 2 96815368 96816125 hybridization