Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2466 ATGCAACTAACACTGGAATTCGGAGGGGGATTGGAGCTTCTTTGTGACTCTAAGAAAATTCACAATGTCAATGTTGAAAACCAAAATGGAGAGGACAAGCTAACTATGAAAGATTTGCTTTCTTGGGTGCGGACCAACTTGATTAAGGAGAGGCCTGAAATGTTCATGAAAGGAGATACCGTGCGACCTGGAGTTCTTGTCCTTGTGAACGATTGTGATTGGGAGCTATCTGGTCAGCTGAATACATCACTAGAAGAGAAAGATGTGGTAGTTTTCATATCAACTTTGCATGGTGGCTAA 300 0.42 MQLTLEFGGGLELLCDSKKIHNVNVENQNGEDKLTMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLNTSLEEKDVVVFISTLHGG* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2466 99 PIRSF Urm1 1 99 IPR015221 GO:0005737|GO:0034227
Ahy12g2466 99 Pfam Urm1 (Ubiquitin related modifier) 3 99 IPR015221 GO:0005737|GO:0034227
Ahy12g2466 99 PANTHER RURM1 PROTEIN 1 99 IPR015221 GO:0005737|GO:0034227
Ahy12g2466 99 SUPERFAMILY MoaD/ThiS 1 99 IPR016155 -
Ahy12g2466 99 CDD Ubl_Urm1 3 99 IPR015221 GO:0005737|GO:0034227
Ahy12g2466 99 Hamap Ubiquitin-related modifier 1 [URM1]. 1 99 IPR015221 GO:0005737|GO:0034227
Ahy12g2466 99 Gene3D - 1 99 IPR012675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2466 Ahy-Chr12 113427891 113430084 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2466 K12161 - gmx:100306072 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2466 12 113427891 113430084 Ahy12g2466 12 113427891 113430084 ECH
Ahy12g2466 12 113427891 113430084 Ahy2g2132 2 96806673 96809014 hybridization