Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2452 ATGGCTCAACCAGTGTTTGTTTCATCAGCCCAAATCTCAAAAGAAGATGAAAAGATAGTGTTTGATTCATCTGTTATGTCATATGAATCCACCATACCCAAAAAATTCATATGGCCTGATGAGTTTAAGCCAAGCCAAGACATACCAGAACTTCAAGTTCCAGAAATTGACATGAAAGCCTTTCACTCTGGTGATCCAAAAGTTATATCAAATCTTTGCTCTAAGATTGATGAGGCATGCAAGAAGCATGGATTCTTTCATGTTGTTAACCATGGCGTGGACGCCGAACTCATAGCGAAAGCTCATGTTTTGATGGATGATTTCTTTGGCATGTCGTTGGCAGAGAAACAGAAGGCTCAGAGAACGCTTACAGATTTTCGTGGGTATGCTAGCAGCTTCACTGGCAGATTCTCTACCAAACTTCCATGGAAGGAAACACTCACTTTTCCTTACTCTGCTGAGAATTCATGCAAAGCTGTGGAGGAATATTTTGTTAATGCTCTTGGGGAAGATTTTCGTCACTTTGGGGAGTTCTACGAGAAATACTGTGATGCAATGAGCAATCTAGCCCTTCAAATCATGGAACTTGTGGGAATGAGCTTAGGAGTTGGGAAATACTTCAGAGACTACTTTGAAGAAAATAACTCTATTATGCGACTGAATTATTATCCACTTTGTCAAACACCTGATTTGACCTTAGGCACTGGGCCCCACTGTGACCCTAATTCCCTTACCATTCTTCATGATGATCAAGTTGCTGGTCTTCAAGTGTTCTTCGATGGCCAATGGTACTTGGTTCCTCCAAGACAAGGTGTCTTCGTTGTTAACATTGGTGACACATTTACGGCTTTATCAAATGGAGTTTACAAGAGTTGTTTGCACAGAGCTGTAGTGAATGACAAATCAGCAAGAAAATCACTTGCTTTCTTCCTGTGTCCTAAGAGGGACAAAGTTGTCAATCCACCAAAGGAACTCATTACTGAAGAGAATCCAAGAAAATATCCAGATTTCAAGTGGCCAACCTTGCATGAATTCACTCAGAAACATTACAGGGTTGATGAAGGAACTCTTGAAACATTCTCCAAGTGGCTTTTAGACAATAAAACTTCAACCAATTAA 1119 0.4039 MAQPVFVSSAQISKEDEKIVFDSSVMSYESTIPKKFIWPDEFKPSQDIPELQVPEIDMKAFHSGDPKVISNLCSKIDEACKKHGFFHVVNHGVDAELIAKAHVLMDDFFGMSLAEKQKAQRTLTDFRGYASSFTGRFSTKLPWKETLTFPYSAENSCKAVEEYFVNALGEDFRHFGEFYEKYCDAMSNLALQIMELVGMSLGVGKYFRDYFEENNSIMRLNYYPLCQTPDLTLGTGPHCDPNSLTILHDDQVAGLQVFFDGQWYLVPPRQGVFVVNIGDTFTALSNGVYKSCLHRAVVNDKSARKSLAFFLCPKRDKVVNPPKELITEENPRKYPDFKWPTLHEFTQKHYRVDEGTLETFSKWLLDNKTSTN* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2452 372 Pfam non-haem dioxygenase in morphine synthesis N-terminal 53 154 IPR026992 -
Ahy12g2452 372 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 14 365 - -
Ahy12g2452 372 PANTHER GIBBERELLIN 20-OXIDASE 14 365 - -
Ahy12g2452 372 Gene3D - 22 351 IPR027443 -
Ahy12g2452 372 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 213 313 IPR005123 -
Ahy12g2452 372 SUPERFAMILY Clavaminate synthase-like 23 350 - -
Ahy12g2452 372 Pfam 2OG-Fe(II) oxygenase superfamily 215 313 IPR044861 -
Ahy12g2452 372 PRINTS Isopenicillin N synthase signature 76 93 - -
Ahy12g2452 372 PRINTS Isopenicillin N synthase signature 273 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2452 Ahy-Chr12 113166043 113169326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2452 13 351 Glycosyltransferase AT5G59530 29.143 2.55e-34 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2452 K05282 - jre:108980245 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2452 12 113166043 113169326 Ahy2g2118 2 96604690 96607901 hybridization