Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2442 ATGGCGGAAGAAGAAAAAGTAGAAGGATTACAGCAACTCAAACACGAAAACCAAGATCTTCCACAAGTGCTTGTTCTTGGTTCTCCAACGTGCTTACAAACCTTAAAACAACTCTACTCTCACAAATTCCGTTTTCTTATCCCAAACACTTCGTTGGACTCACTCTACCCTCTCACCGCTCCACTTTCATCCATCTCCGCCGTCATCTGCAGTGCTTCCTTCTCCCTCACCGCCCCCGTCCTCCGCCTCCTCCCCTCCCTCCGACTAGTCGTCACCACCAGTGCCGGCACCGATCACATTGACCTCAATGAGTGTGGCTGCCGAGGGATACAGGTAGCTGGCGCCGGAAAACTGTTTTCCGAGGAGGTGGCTGATATGGCGGTGGGGCTGCTCATCGACGTCATGAGGAGAGTCTCGGCTGCCGATAGATTCGTACGGACGAGCTGTGAAGCTGCCACGTGGGATTTCCCTCTCGGTTACAAGATATCAGGAAAGCGGATTGGCATAGTTGGACTCGGAAGCATTGGCATGGAAGTTGCTAAGAGACTCGAATGTTTTGGTTGCACCATCTTATACCACTCAAAGCATAAAAAATCTGCAGTTTCATACCCTTTCTATAACAGTGTTATTGACCTTGCTGCTACTAGCAATGCACTTGTTCTCTGTTGTGCACTGAATGAGGAAACAAGGCACATAGTAAACAGGGAAGTGATGTTGGCATTGGGAAAAGAAGGGTTCATTGTGAATGTTGGGAGAGGATCTCTTATTGATGAGAAGCAATTGGTGAAGTTTTTGATGGATGGTGAAATTGGTGGTGCTGCTTTGGATGTGTTTGAAGATGAACCTAATGTTCCTAAAGAGCTACTCAGTATGGATAATGTGGTTTTGACTCCACATTGTGCTGCTTTTACTTCTGAATGTATAATCAAATTGTGTGAACTTGTGGCTGGGAATATAGAAGCCTCGTTATCAGATAAGCCCTTAATTACTCAGGTGAAATGGTGA 1005 0.4657 MAEEEKVEGLQQLKHENQDLPQVLVLGSPTCLQTLKQLYSHKFRFLIPNTSLDSLYPLTAPLSSISAVICSASFSLTAPVLRLLPSLRLVVTTSAGTDHIDLNECGCRGIQVAGAGKLFSEEVADMAVGLLIDVMRRVSAADRFVRTSCEAATWDFPLGYKISGKRIGIVGLGSIGMEVAKRLECFGCTILYHSKHKKSAVSYPFYNSVIDLAATSNALVLCCALNEETRHIVNREVMLALGKEGFIVNVGRGSLIDEKQLVKFLMDGEIGGAALDVFEDEPNVPKELLSMDNVVLTPHCAAFTSECIIKLCELVAGNIEASLSDKPLITQVKW* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2442 334 Gene3D - 120 304 - -
Ahy12g2442 334 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 128 301 IPR006140 GO:0051287
Ahy12g2442 334 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 42 147 - -
Ahy12g2442 334 PANTHER D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE FAMILY PROTEIN-RELATED 18 332 - -
Ahy12g2442 334 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 62 332 IPR006139 GO:0016616|GO:0051287
Ahy12g2442 334 Gene3D - 58 327 - -
Ahy12g2442 334 CDD HPPR 21 321 - -
Ahy12g2442 334 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 167 194 IPR029752 -
Ahy12g2442 334 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 18 332 - -
Ahy12g2442 334 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 120 302 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2442 Ahy-Chr12 112840247 112842015 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2442 - K15919 gmx:100776772 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2442 12 112840247 112842015 Ahy12g2442 12 112840247 112842015 ECH
Ahy12g2442 12 112840247 112842015 Ahy2g2111 2 96459201 96461197 hybridization