Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2432 ATGATGGCGCGCTCAGAAGCTGTAAGTTCAGTAGGAGATAATATGTCGGTAGATAATGGATCAAGGAAGCCTCGGATTCTACTCGCAGCTAGTGGGAGTGTGGCTGCTGTCAAATTTGCAAATCTTTGTCATTGTTTTTCTGAGTGGGCAGAAGTAAGAGCAGTTGCAACGACTGCGTCACTGCATTTTATTGACAGAGAAGCAATTCCTAAGGATATAGTTTTATATACTGACGATAATGAATGGTCAAGTTGGACGAAACTAGGAGATAGTGTGCTTCACATTGAGCTTCGCAAATGGGCTGATATCATGGTCATCGCTCCATTATCGGCAAACACTCTTGGCAAGATTGCCGGAGGGTTGTGTGACAATCTACTGACATGTATTGTTCGAGCATGGGACTACAGTAAGCCATTCTTTGTTGCACCAGCCATGAACACTTTCATGTGGAACAATCCTTTCACGGAACGACATCTCATCGCCATTGACGAGCTCGGTATATCTCTCATCCCTCCGGTTACAAAGCGGTTAGCTTGTGGTGATTATGGCAATGGTGCAATGGCTGAACCAGCTACCATTTACTCTACTGTGAGGCTCTTTTACGAGTCAAAGGCTCAACAAGGTCCTGGTGCTCAGCAATGA 642 0.4517 MMARSEAVSSVGDNMSVDNGSRKPRILLAASGSVAAVKFANLCHCFSEWAEVRAVATTASLHFIDREAIPKDIVLYTDDNEWSSWTKLGDSVLHIELRKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYSKPFFVAPAMNTFMWNNPFTERHLIAIDELGISLIPPVTKRLACGDYGNGAMAEPATIYSTVRLFYESKAQQGPGAQQ* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2432 213 SUPERFAMILY Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 23 200 IPR036551 GO:0003824
Ahy12g2432 213 Gene3D - 23 211 IPR036551 GO:0003824
Ahy12g2432 213 Pfam Flavoprotein 25 198 IPR003382 GO:0003824
Ahy12g2432 213 PANTHER BNAA01G27100D PROTEIN 13 204 - -
Ahy12g2432 213 PANTHER HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY 13 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2432 Ahy-Chr12 112723610 112729554 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2432 K01598 - gmx:100499989 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2432 12 112723610 112729554 Ahy2g2105 2 96371852 96378909 hybridization
Ahy14g2272 14 123983969 123986361 Ahy12g2432 12 112723610 112729554 PCT
Ahy4g1999 4 112717229 112719594 Ahy12g2432 12 112723610 112729554 PCT
Ahy12g2432 12 112723610 112729554 Ahy14g2266 14 123911499 123913911 PCT
Ahy12g2432 12 112723610 112729554 Ahy4g1995 4 112660752 112663266 PCT