Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy12g2404 | ATGGCGAGTGCGGTAGATGCATCTGGAAACCCGATCCCGACATCATCGGTTTTGATGGCGGCATCGAAGCACATTGGGGTAAGATGCCAAGCAGAGAACGTGGAGTTTCTCAAATGCAAGAAGAAGGATCAGAACCCTGAAAAGTGTCTCGATAAAGGGCGTGACGTCACTCGCTGCGTCCTTGGCCTTCTCAGGGATCTACACCAAAAGTGCACAAAGGAGATGGATGACTATGTTGGCTGCATGTACTACCGCACAAACGAATTTGACATGTGTCGCAAAGAGCAGCAAGCTTTCGAAAAAAAATGTACATTGGAATGA | 321 | 0.4798 | MASAVDASGNPIPTSSVLMAASKHIGVRCQAENVEFLKCKKKDQNPEKCLDKGRDVTRCVLGLLRDLHQKCTKEMDDYVGCMYYRTNEFDMCRKEQQAFEKKCTLE* | 107 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy12g2404 | 106 | PANTHER | NADH-UBIQUINONE OXIDOREDUCTASE | 1 | 105 | IPR016680 | GO:0006120 | |
| Ahy12g2404 | 106 | ProSiteProfiles | Coiled coil-helix-coiled coil-helix (CHCH) domain profile. | 68 | 106 | - | - | |
| Ahy12g2404 | 106 | ProSiteProfiles | Coiled coil-helix-coiled coil-helix (CHCH) domain profile. | 26 | 67 | - | - | |
| Ahy12g2404 | 106 | PANTHER | CHCH-RELATED | 1 | 105 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy12g2404 | Ahy-Chr12 | 112239302 | 112241447 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy12g2404 | K03952 | - | gmx:100527451 | 210.305 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy12g2404 | 12 | 112239302 | 112241447 | Ahy2g2082 | 2 | 96115651 | 96117782 | hybridization |