Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2389 ATGGCTTCTGCGGAAGCCGATTCCCGACTGAGTAGGATCGTCGTCCCCGCGCTCGAGGCGATCGTGAAGAACGTGTCATGGAGGAAGCACGCGAAGCTCGCGCACGAATGCAAGTCGGTGATCGACAGGCTTAGAAATAACAATGCAGCGGAGACGGCTGCGTCGCCGTCGGGCTCTCCTTCCGACGGGGAGCCCGATTCCACGTCGCCGGGACCCCTCCACGACGGCGGTCCCGTGGAGTACTCCTTCGCGGAGTCGGAATCGATCCTCAGTCCTCTCATCAATGCCGCGAAATCCGGCGTGCTGAAGATCGCTGAGCCCGCCGTAGACGCAATCCAGAAGCTCATCGCGTACGGCTACCTGCGCGGCGAGGCGGATCCCGGAGGCTCCTCACCGGAGGCGAAATTGCTCTCGAATATGATCGAATCGGTTTGCAAGTGCAATGAGTTAGGAGACGAAACAATGGAGTTGCAGGTTCTGAAAACGCTGTTGTCCGCGGTAACCTCAATTTCGTTGCGAATTCACGGTGATTGCTTGCTTATGATAGTGCGAACCTGTTATGATTTATATCTAACGAGTAAAACCGCGGTGAATCAAACAACGGCGAAAGCCTCGTTGATTCAGATGCTGGTTATTGTGTTTAGGAGAATGGAAGCGGATTCTTCCACGGTTCCTATTCAGCCGATTGTGTTGGCTGATTTGATGGAGCCAGCAGAAAAATCTGATTCTTCCACGCAGTTTGTGCAAGGTTTTATCACCAAGATTATGCAGGACATTGATGGTGTTTTGAACCCTGGTACACCTAGTGCTAAGGTTTCGATGCTAGGTGGCCATGATGGTGCGTTTGAGACTACGGCGACGGTGGAGGGGACAAACCCGACGGATTTGTTGGATTCGACTGATAAGGACATGTTGGATGCGAAGTATTGGGAGATCAGTATGTATAAGACGGCTCTAGAAGGGAGGAAGGGAGAGCTTGTGGATGGTGGTGACATTGTGGAGAGGGATGATGATTTAGAGGTCAAGATTGGTAACAAGTTGAGGAGGGATGCCTTTTTGGTATTCAGGGCACTCTGTAAATTGTCGATGAAGACGCCCCCTAAAGAGGCTTCTTCCGATCCCCAGTTAATGAAGGGAAAGATTGTGGCTCTGGAGCTATTGAAGATTTTGCTGGAGAACGCTGGAGCTGTTTTCAGGACTAGTGAAAGGTTTCTAGGTGCCATCAAGCAGTACTTATGTTTATCATTGTTGAAGAACAGTGCTTCAACTCTTTTGATCGTTTTTCAGCTATCTTGCTCCATCTTCATCAGTCTGGTATCAAGATTTAGAGCTGGATTGAAGGCCGAAATTGGTGTTTTTTTCCCTATGATAATACTCAGGGTACTGGAAAATGTTTCTCAACCTAATTTTCAGCAAAAGATGATAGTGCTTCGGTTTCTCGAGAAACTTTGCATTGATTCACAGATATTGGTCGACATATTTATCAACTATGATTGTGATGTCAATTCATCCAACATTTTTGAGAGGATGGTCAATGGACTTCTTAAGACTGCTCAAGGTGTCCCTCCTGGTGCAGCCACCACACTTCTGCCACCTCAAGAGGCAACACTAAAACTTGAAGCCATGAAAACCTTGGTTGCTGTTTTAAAATCAATGGGAAGCTGGCTGAACAAACAATTGATAATTCCAGATCCTCATTCTGCTAAGAAAATTGAAGCAGCTGACAGCAGTGCTGAGGCTGGAGGTTTGACCATGGTAAATGGAAATGGAGAAGATCCCGTTGGACAAGACTCTCCACCTGAAATCTCAAATGATGCATCTGATGTTTCAAATATTGGGCAGCGACGGGCTTATAAACTGGAACTTCTGGAAGGTATATCACTTTTTAACAGGAAACCTAAGAAAGGAATCGAGTTCCTCATCAATGCCAAAAAAGTGGGTAATTCACCAGAGGATATAGCTGCTTTTCTTAAAGATGCATCTGGGTTGAACAAGACTTTGATTGGTGATTTTCTGGGAGAAAGGGAAGAATTATCCTTGAAGGTTATGCATGCCTATGTGGATTCATTTGACTTCCAAGGGATGGAGTTTGATGAGGCAATTAGGGTCTTTCTTCTAGGCTTTCGACTGCCTGGTGAGGCACAGAAGATTGATCGGATCATGGAAAAGTTTGCTGAACGTTATTCCAAATGTAATCCAAAGGCCTTTTCTAGTGCCGACACAGCCTATGTCCTTGCTTATTCTGTAATATTGCTCAACACAGATGCTCACAATCCTATGGTGAAGAACAAGATGTCTGTCGATGATTTCATAAGAAACAATCGTGGCATTGATGATGGAAAAGATCTCCCCGAGGAGTATTTGAGGTCCTTGTTTGAGAGAATATCCAGAACTGAGATCAAAATGAAAGATGACAATATGGTTCCACAGCAAAAACAGGCTGCAAACTCTAATAGACTTTTAGGATTGGATAGTATATTGAATATCGTGACCAACAAGCATTGGGAAGACAGCCATATGGAAACCAGTGATGATCTTATCCGTCATATGCAACAACAATTCAAAGAAAAAGCTCGCAAATCCGAGTCGGTCTATTATGCGGCAACAAATGTTGTAATCCTTAGATTCATGATTGAGGTGTGTTGGGCACCAATGTTAGCTGCCTTCAGTGTTCCTCTTGATCAAAGTGATGATGAAGTTGTAATATCTCTGTGTCTCGAGGGCTTCCGCTATGCTATTCATGTTACTTGTGGAACGTCCATGAAGACACATCGAGATGTTTTTGTGACTTCACTAGCAAAGTTTACCTCTCTGCATTCTCCTGCTGCCATTAAGCAAAAAAATGTAGATGCAATTAAGGCAATAGTTACTATTGCTGATGAGGATGGAAATTACTTACAAGAAGCTTGGGAGCATATCTTGACCTGTGTTTCCCGGTTTGAGCATCTACTTCTTCTCGGAGAGGGCGCTCCACCAGACGCTACATTCTTTTCCTTTCCTCAGAATGAGTCAGAAAAGGCAAAGCAAACGAAATCAACCATTCTTCCTGTTTTGAAAAAGAAGGGACCTGGTAGGTTACAGTATGCTGCTGCCACATTGATGCGAGGTTCGTATGACAGTGCTGGAATTGGTGGCAATGCTTCTGGAACCATCACATCAGAACAGGTGAACAATATAGTTTCTAATTTGCACATGTTGGAACAAGTTGGAAGCTCTGAAATGAATCGCATATTCACTCGGAGTCAGAAGTTGAACAGTGAGGCCATAGTAGATTTTGTTAAGGCTCTGTGCAAGGTCTCCATGGACGAACTAAGATCTCCGTCTGATCCCCGAGTTTTCAGCCTCACAAAGATAGTTGAGATTGCGCACTATAATATGGACCGCATCAGGCTTGTGTGGTCGAGCATCTGGCATGTTCTCTCTGATTTCTTTGTGACTATTGGCTGTTCTGGAAACCTTTCAGTTGCAATTTTTGCGATGGATTCCTTGCGTCAGTTGTCAATGAAATTTCTAGAGCGGGAAGAGTTGGCTAATTACAATTTTCAAAATGAATTTATGAAGCCTTTTGAAATTGTCATGCAAAAGAGTAGTGCTGTTGAGATCAGAGAACTAATTATCCGATGTGTCTCTCAGATGGTTTTATCTCGTGTCAAAAATGTCAAATCTGGATGGAAGAGCATGTTCACGGTATTCACTACAGCAGCATATGATGACCATAAGAACATTGTATTCTTGGCTTTTGAAATTATTGAGAAGATTATTCGAGATTATTTTCCATACATTACTGAGACAGAGACCACCACATTCACTGACTGTGTGAATTGTCTAATTGCTTTTACAAATACTAGATTCAACAAAGAGATTAGCCTGAATGCCATTGCTTTTCTTCGGTTCTGCGCAACCAAACTAGCAGAAGGAGACTTTGGTTCATCGTCAAGAAATAAGGATAAGGAAGTCTCTAGAAAGGCTTCCCCGCGTTCACCTCAAACAGGAAAAGAGGGGAAACAAGACAATGGAGAGGTGACTCAAAAGGAGGATCATCTCTATTTTTGGTTTCCTCTATTGGCTGGATTATCTGAGCTTAGTTTTGATCCAAGGCCTGAGATTAGGAAGAGCGCCTTAGAAATCCTATTTGAATCCTTGCGCAATCATGGTCATCTTTTTTCACTACCTTTATGGGAAAGAGTATTTGAGTCAGTCCTCTTTCCCATATTTGATTTTGTACGACATACTATAGATCCTTCTGGGAGTAGTTCCCCTGTCAATAATGAAGTAGAGATTGTTGGTGATCTTGAGCACGATGCTTGGCTTTATGAGACATGCACATTGGCCCTCCAATTGGTTGTAGATCTTTTTATCAACTTTTACGACACTGTCAATCCACTTTTAAGAAAGGTCCTGATGCTACTGGTAAGCTTTATACAGCGCCCTCATCAAAACCTTGCTGGCATCGGTATTGCTGCATTTGTACGTTTGATGAGTAATGCTGGGGAGCTATTTTCTGATGAAAAGTGGTTCGAAGTGGTTTTGTCGTTAAAAGAAGCAGCTATTGCAACTCTCCCTGACTTCTCATTCTTTGAAAATGAAGACTTTGTGAATAGAAATTATGAACATGCACCAACAGCTGAAGATGACGGAGATCTTCCTGACTCGGCGTCACCTGAAACTTTAGCAAACTTGAGGACTCGCCATCTTTTTGCGTATTTGTCTGATGCAAAAAGCCGAGCTGCTGTTGAGCTTTTGTTGATTCAGGCAGTGATGGAGATATATAACATGCATCGTTTTCGCCTGTCAGCAAAACACATGCTAGTCCTGTTTGATGCATTGCATGAGGTGGCATTACATGCTCACAAGATTAACAGCGATACTACTTTACGTTCAAAGCTTCAAGAGTTTGGTTCCATGACCCAAATGCAAGACCCTCCATTATTACGACTTGAGAATGAGTCGTACCAAATATGCCTTACATTTTTACAGAACCTCATTATCGACAGGCCTTATAGTTATGAGGAGAGTGAGGTTGAATCTCATCTTGTTCGGCTATGCCAGGAGATCTTAGAGTTTTATATTGTAGTTGCAAGTTCTGGATTTACAACTCAGCCTTCTCGTGACAGACAGCCACATTGGTTAATTCCATTAGGGTCTGGGAAGCGGAGAGAACTGGCTACACGTTCACCTCTTGTCGTGGCTACGCTTGAGGCTATTTGTAGTTTAGGAGATGCTTCATTTGAGAAGAACCTGTCTAAATTTTTCCCTCTCCTTTCAAGCTTGGCAAGTTGCGAACATGGTACGCACGAAGTCCAGGTTGCTCTCTGTGATATGCTCAGTTTATCAGTTGGTCCTGTTCTGCTGAAGTCATGTTGA 5364 0.4364 MASAEADSRLSRIVVPALEAIVKNVSWRKHAKLAHECKSVIDRLRNNNAAETAASPSGSPSDGEPDSTSPGPLHDGGPVEYSFAESESILSPLINAAKSGVLKIAEPAVDAIQKLIAYGYLRGEADPGGSSPEAKLLSNMIESVCKCNELGDETMELQVLKTLLSAVTSISLRIHGDCLLMIVRTCYDLYLTSKTAVNQTTAKASLIQMLVIVFRRMEADSSTVPIQPIVLADLMEPAEKSDSSTQFVQGFITKIMQDIDGVLNPGTPSAKVSMLGGHDGAFETTATVEGTNPTDLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGGDIVERDDDLEVKIGNKLRRDAFLVFRALCKLSMKTPPKEASSDPQLMKGKIVALELLKILLENAGAVFRTSERFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIILRVLENVSQPNFQQKMIVLRFLEKLCIDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGAATTLLPPQEATLKLEAMKTLVAVLKSMGSWLNKQLIIPDPHSAKKIEAADSSAEAGGLTMVNGNGEDPVGQDSPPEISNDASDVSNIGQRRAYKLELLEGISLFNRKPKKGIEFLINAKKVGNSPEDIAAFLKDASGLNKTLIGDFLGEREELSLKVMHAYVDSFDFQGMEFDEAIRVFLLGFRLPGEAQKIDRIMEKFAERYSKCNPKAFSSADTAYVLAYSVILLNTDAHNPMVKNKMSVDDFIRNNRGIDDGKDLPEEYLRSLFERISRTEIKMKDDNMVPQQKQAANSNRLLGLDSILNIVTNKHWEDSHMETSDDLIRHMQQQFKEKARKSESVYYAATNVVILRFMIEVCWAPMLAAFSVPLDQSDDEVVISLCLEGFRYAIHVTCGTSMKTHRDVFVTSLAKFTSLHSPAAIKQKNVDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLLLLGEGAPPDATFFSFPQNESEKAKQTKSTILPVLKKKGPGRLQYAAATLMRGSYDSAGIGGNASGTITSEQVNNIVSNLHMLEQVGSSEMNRIFTRSQKLNSEAIVDFVKALCKVSMDELRSPSDPRVFSLTKIVEIAHYNMDRIRLVWSSIWHVLSDFFVTIGCSGNLSVAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFEIVMQKSSAVEIRELIIRCVSQMVLSRVKNVKSGWKSMFTVFTTAAYDDHKNIVFLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNTRFNKEISLNAIAFLRFCATKLAEGDFGSSSRNKDKEVSRKASPRSPQTGKEGKQDNGEVTQKEDHLYFWFPLLAGLSELSFDPRPEIRKSALEILFESLRNHGHLFSLPLWERVFESVLFPIFDFVRHTIDPSGSSSPVNNEVEIVGDLEHDAWLYETCTLALQLVVDLFINFYDTVNPLLRKVLMLLVSFIQRPHQNLAGIGIAAFVRLMSNAGELFSDEKWFEVVLSLKEAAIATLPDFSFFENEDFVNRNYEHAPTAEDDGDLPDSASPETLANLRTRHLFAYLSDAKSRAAVELLLIQAVMEIYNMHRFRLSAKHMLVLFDALHEVALHAHKINSDTTLRSKLQEFGSMTQMQDPPLLRLENESYQICLTFLQNLIIDRPYSYEESEVESHLVRLCQEILEFYIVVASSGFTTQPSRDRQPHWLIPLGSGKRRELATRSPLVVATLEAICSLGDASFEKNLSKFFPLLSSLASCEHGTHEVQVALCDMLSLSVGPVLLKSC* 1788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2389 1787 Pfam BIG2 C-terminal domain 1578 1775 IPR046455 -
Ahy12g2389 1787 Gene3D - 611 692 - -
Ahy12g2389 1787 Pfam Domain of unknown function (DUF1981) 1169 1251 IPR015403 -
Ahy12g2389 1787 MobiDBLite consensus disorder prediction 581 608 - -
Ahy12g2389 1787 MobiDBLite consensus disorder prediction 1309 1323 - -
Ahy12g2389 1787 Pfam C-terminal region of Mon2 protein 1349 1426 IPR032817 -
Ahy12g2389 1787 CDD Sec7 618 800 IPR000904 GO:0005085|GO:0032012
Ahy12g2389 1787 Pfam Sec7 domain 620 800 IPR000904 GO:0005085|GO:0032012
Ahy12g2389 1787 SUPERFAMILY ARM repeat 384 1504 IPR016024 -
Ahy12g2389 1787 ProSiteProfiles SEC7 domain profile. 611 798 IPR000904 GO:0005085|GO:0032012
Ahy12g2389 1787 SUPERFAMILY Sec7 domain 615 805 IPR035999 GO:0005085|GO:0032012
Ahy12g2389 1787 MobiDBLite consensus disorder prediction 1307 1341 - -
Ahy12g2389 1787 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 220 IPR032629 -
Ahy12g2389 1787 MobiDBLite consensus disorder prediction 51 66 - -
Ahy12g2389 1787 SMART sec7_5 615 800 IPR000904 GO:0005085|GO:0032012
Ahy12g2389 1787 Gene3D - 693 812 IPR023394 -
Ahy12g2389 1787 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 348 506 IPR032691 -
Ahy12g2389 1787 MobiDBLite consensus disorder prediction 51 78 - -
Ahy12g2389 1787 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 9 1780 - -
Ahy12g2389 1787 PANTHER SEC7 DOMAIN-CONTAINING PROTEIN-RELATED 9 1780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2389 Ahy-Chr12 112040810 112050832 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2389 K18442 - gmx:100798955 2982.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2389 12 112040810 112050832 Ahy2g2064 2 95908803 95916402 hybridization
Ahy14g2235 14 122436477 122445846 Ahy12g2389 12 112040810 112050832 PCT
Ahy4g1969 4 112001100 112010524 Ahy12g2389 12 112040810 112050832 PCT
Ahy12g2389 12 112040810 112050832 Ahy14g2235 14 122436477 122445846 PCT
Ahy12g2389 12 112040810 112050832 Ahy4g1969 4 112001100 112010524 PCT