Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2334 ATGTCGCACATAGACAGCGCTCCTTCGACGCCAGGCAAGGTCAAGATGGAGAAATCATCGTACTTCTTCACGCGCGGAGGCGGCGCGCGTTGGCACTACTCGCTCGCCAAGCTCACGGTCTGGTCATTCGCCTTCTTGGCCCTCATCTTGATCTTCTTCCTCCGATCGCCGGCGCCGTCGGCGATCACCTCCGCGGCTGACCCGTCGCGCCGGTCATTGAGGAACTACAATTGGGGCGGGTCCGCCTGGGAGAAGCGGGTACGGGCCTCGGCCCGGGCCCGCTCCAGCAATGGACTAACCGTATTGGTAACTGGCGCTGCCGGTTTCGTAGGGACCCACGTCTCGTCGGCGCTGAAGCGCCGGGGAGATGGGGTCCTCGGCATTGACAATTTCAATGACTACTATGACCCTTCTTTGAAGCGTGCGCGGCAAGCTTTGTTGGAGCGCACTGGTGTGTTCATTGTGGAAGGTGACATCAATGATGAAGCTTTGCTGAGGAAGCTCTTTGAGGTTGTTCCATTCACACATGTTATGCATTTGGCTGCTCAAGCTGGTGTGAGGTATGCTATGGAGAACCCTGGCTCTTATGTGCATAGTAACATTGCTGGTTTTGTTAATTTGCTTGAGGTTTGTAAGAGTGTGAATCCACAACCTGCTATAGTTTGGGCTTCTAGTAGCTCAGTTTATGGGTTGAACACTAAGGTGCCATTTAGTGAGAAGGATAGGACTGATCAGCCTGCTAGTTTGTATGCTGCGACAAAGAAGGCCGGTGAGGAGATTGCACACACCTATAATCATATATACGGGCTATCGTTGACTGGGTTGAGGTTCTTTACGGTTTATGGTCCGTGGGGTAGACCTGACATGGCCTACTTCTTCTTCACTAAGGATATATTGAAGGGGAAGCAGATAGCGATCTTTGAGGCCGCAAATCATGGGACGGTTGCAAGGGATTTCACATACATAGATGATATTGTGAAGGGTTGTTTGGGGGCGTTGGATACTGCCGAGAAGAGCACCGGGAGTGGGGGGAAGAAGAGAGGGCCGGCGCAGCTGAGGGTGTTCAATTTGGGGAATACTTCACCTGTGCCTGTTAGTGAACTTGTGAGCATTTTGGAGAGGCTGTTGAAGGTTAAGGCAAAGAGGAACATCATGAAGTTGCCGCGGAATGGGGATGTGCAGTATACCCATGCGAATATTAGCTACGCGCAGAGGGAGCTTGGGTATAAGCCTACGACGGATCTGCAGACTGGCTTGAAGAAATTTGTTCGGTGGTACCTGAATTACTATTCTGATGGGAAAAAAGCTGTTGAGTGA 1317 0.5186 MSHIDSAPSTPGKVKMEKSSYFFTRGGGARWHYSLAKLTVWSFAFLALILIFFLRSPAPSAITSAADPSRRSLRNYNWGGSAWEKRVRASARARSSNGLTVLVTGAAGFVGTHVSSALKRRGDGVLGIDNFNDYYDPSLKRARQALLERTGVFIVEGDINDEALLRKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSVNPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKQIAIFEAANHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVSELVSILERLLKVKAKRNIMKLPRNGDVQYTHANISYAQRELGYKPTTDLQTGLKKFVRWYLNYYSDGKKAVE* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2334 438 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 96 430 IPR036291 -
Ahy12g2334 438 Gene3D - 99 432 - -
Ahy12g2334 438 PRINTS Nucleotide sugar epimerase signature 317 332 - -
Ahy12g2334 438 PRINTS Nucleotide sugar epimerase signature 392 409 - -
Ahy12g2334 438 PRINTS Nucleotide sugar epimerase signature 352 367 - -
Ahy12g2334 438 PRINTS Nucleotide sugar epimerase signature 127 143 - -
Ahy12g2334 438 Pfam NAD dependent epimerase/dehydratase family 101 338 IPR001509 -
Ahy12g2334 438 PANTHER EPIMERASE-RELATED 4 436 - -
Ahy12g2334 438 PANTHER UDP-GLUCURONATE 4-EPIMERASE 2-RELATED 4 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2334 Ahy-Chr12 110943021 110945469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2334 1 436 Miscellaneous Gene Families AT4G00110 84.633 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2334 K08679 - gmx:100788739 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2334 12 110943021 110945469 Ahy2g2017 2 94975879 94978327 hybridization