Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2297 ATGTTTACAAGAACGCTTCAATTTCAATTCCAATTAGACTCCATTGATCATAAAACAATCTTATTAGCTTTTAGACGCACTCTACTACTATTTCTCTTTTCTTCTTCAATTCTTATTAGTAGTAGTGTCCATGGCTACACCACAAGATCTCATATCTTCATCTATGCAACTTGTTCTCAAGAGAAATACCAACCAAACACACCCTTTGAACCAAACTTAAATTCTTTATTATCTTCAATTGTTACTTCCTCTTCAGATGTTTCTTACAATAGCTTTTCCATTATAAATAATAATGGAACCTCATCATCAACACCTTTATTAGAAGGTTCCATATATGGCTTGTACCAATGTAGGGGTGATTTGGACCCAATTGAATGCTCAAAATGTGTTCAAAATTCAGTTAACCAAATAGGGCTAATTTGTCCCTATTCACTTAGTGCATCTTTGCAACTTGAAGGGTGTTACATAAGATATGAACATTTTGATTTCTTAGGAAAACTTGACACAAGTCTTAGGTACAAGAAATGTAACAAAAATGTTGTGAGCAATGATGTTGAGTTCCTTAGGCGAAGGGATGATGTTCTTGGTGATTTGCAAGCAAGAAGAAATAGTGACTTTAGAGTTAGTAATTCAGGACTTGTTGAAGGGTATGCTCAGTGTTTGGGAGATCTAAGTGCTGAAAATTGCAACTCATGCATGGCAGAAGCAGTGATGAAGTTGACGAGATTTTGTGGATCAACAGTATCAGGTGATGTATTCTTGGGACAATGTTATGCAAGGTATTGGAAATCTGGCCACTACAACGATGATGAACCAGATTCTTCGAATGAGGACCAAGTGGGGAAATCAATTGCCATTATTGTAGGGGTTGTATTAGGTCTAGCTATTCTTGTTGTTGTTCTCTCAGTCTGCAAAAACGCCATGGTGAAAAGAATCCATTGA 942 0.3631 MFTRTLQFQFQLDSIDHKTILLAFRRTLLLFLFSSSILISSSVHGYTTRSHIFIYATCSQEKYQPNTPFEPNLNSLLSSIVTSSSDVSYNSFSIINNNGTSSSTPLLEGSIYGLYQCRGDLDPIECSKCVQNSVNQIGLICPYSLSASLQLEGCYIRYEHFDFLGKLDTSLRYKKCNKNVVSNDVEFLRRRDDVLGDLQARRNSDFRVSNSGLVEGYAQCLGDLSAENCNSCMAEAVMKLTRFCGSTVSGDVFLGQCYARYWKSGHYNDDEPDSSNEDQVGKSIAIIVGVVLGLAILVVVLSVCKNAMVKRIH* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2297 313 Gene3D - 168 264 IPR038408 -
Ahy12g2297 313 Gene3D - 50 163 IPR038408 -
Ahy12g2297 313 ProSiteProfiles Gnk2-homologous domain profile. 169 266 IPR002902 -
Ahy12g2297 313 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 25 308 - -
Ahy12g2297 313 ProSiteProfiles Gnk2-homologous domain profile. 51 163 IPR002902 -
Ahy12g2297 313 PANTHER PLASMODESMATA-LOCATED PROTEIN 8 25 308 - -
Ahy12g2297 313 Pfam Salt stress response/antifungal 58 159 IPR002902 -
Ahy12g2297 313 Pfam Salt stress response/antifungal 176 261 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2297 Ahy-Chr12 110357562 110360619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2297 110 311 Receptor kinase-like Gene Family AT5G40380 30.516 2.47e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2297 - - adu:107475641 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2297 12 110357562 110360619 Ahy2g1984 2 94548956 94557250 hybridization