Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2270 ATGAGTTCCGGCGAGCTTCTCCACATACACCCCCAGGAGCTGCAGTTCCCCTTTGAATTGAGGAAGCAGATCTCTTGCTCTTTGCAGCTCTCTAACAAGACAGATAACTATGTGGCTTTCAAGGTTAAGACAACAAACCCAAAGAAGTACTGTGTAAGACCTAACACTGGAATTGTGTTGCCAAGGACTACGTGTGATATTATAGTGACAATGCAAGCCCAAAAGGAGGCACCACCTGATATGCAATGCAAAGATAAGTTTCTCCTTCAAAGCGTAGTTGCACCATCCGGAGCAACCCCAAAAGATATTACTCCAGAAATGTTCAATAAAGAATCTGGCCATGATGTAGAAGAGTGCAAATTGAGGGTTGTTTATGTTTCCCCTCCTCGACCACCGTCCCCTGTCCAAGAAGGTTCGGACGAAGAGTCCTCGCCTCGAGCATCTATTTCAGAAAATGGGCATTCAAGTGTTCCTGAATTTACAGCTGCTTCAAAAGCTTTCAATGAGCACGCCGAACAGGATGGTTCAATTGAGGCAAGGGCTCTTATTTCGAAGGTCACCGAGGAGAGGAATTCTATTATTGATCAAAATAAAAGACTTCAGCAAGAATTGGAACTTCTGAGGCGTTCTGCAAAGAGAGGTGGTGGTGGTATCCCATTTATATATGTAGTGCTTGTTGGCATTATTGGCATCATTTTGGGTTTCCTACTGAAGAGAACATGA 723 0.4412 MSSGELLHIHPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRTTCDIIVTMQAQKEAPPDMQCKDKFLLQSVVAPSGATPKDITPEMFNKESGHDVEECKLRVVYVSPPRPPSPVQEGSDEESSPRASISENGHSSVPEFTAASKAFNEHAEQDGSIEARALISKVTEERNSIIDQNKRLQQELELLRRSAKRGGGGIPFIYVVLVGIIGIILGFLLKRT* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2270 240 Coils Coil 183 210 - -
Ahy12g2270 240 SUPERFAMILY PapD-like 2 140 IPR008962 -
Ahy12g2270 240 Pfam MSP (Major sperm protein) domain 7 110 IPR000535 -
Ahy12g2270 240 MobiDBLite consensus disorder prediction 137 155 - -
Ahy12g2270 240 PIRSF VAMP_assoc_prot 1 239 IPR016763 GO:0005789
Ahy12g2270 240 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 238 - -
Ahy12g2270 240 MobiDBLite consensus disorder prediction 127 155 - -
Ahy12g2270 240 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 238 IPR016763 GO:0005789
Ahy12g2270 240 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Ahy12g2270 240 Gene3D Immunoglobulins 2 130 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2270 Ahy-Chr12 109704097 109707876 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2270 - - gmx:100305725 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2270 12 109704097 109707876 Ahy12g2270 12 109704097 109707876 ECH
Ahy12g2270 12 109704097 109707876 Ahy2g1958 2 93982876 93986585 hybridization