Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2265 ATGAAGTTTGGTAAGAGGTTGAAGCAACAGATTCAAGATTCCCTCCCCGAATGGAGGGACAAGTTCTTGTCGTACAAGGAACTGAAGAAGCTTGTGAAGCTCATTTCGGCCGCGCCAACGCGCCGAAATGAGTCTTTGGAGTATGGCAAGGCTGAGTCTGATTTCGTGTACTTGTTGGACATTGAGATTGACAAGTTCAATGGCTTCTTCATGGAGCAAGAAGAAGAGTTTGTTATTCGCCATGAGAACTTAAAACAGAAGATAAAGAGAGTGGTTGATTTATGGGGACCAAATGGCATTCACCCTTCAGAAGAGAATTACAAGGAGGAGATGGAAAAAATCAGAAAAGCAATTGTTGATTTCCATGGTGAAATGGTTCTCTTGGTAAACTACAGCAACATCAATTACACAGGGCTGGCTAAGATTCTGAAAAAATATGACAAGAGAACAGGAGGACTATTGCGTTTGCCATTCATTCAGAAAGTTTTGGTGCAACCCTTTTTCACAACTGATATAATCTCAAACCTAGTGAAGGAATGTGAGAGCATAATTGACACAGTATTCCCAGCAGAGGAAGCAGCTGAAAGAGCAAAAGAAGCCATTGTTGTGGCAGGGGAAGGTATTTTCAGGAACACTGTTAAGGCTTTGCTTACAATGCAAGAAATAAGAAAAGGGAGTTCAACTGAGAGTCCTTTTTCTTTGCCTCCTCTTAATTTGCCGGATTCTGATCTCATCCAATCAATACAACTCAATGCTGCAGTTCCAATTGTGTAG 774 0.4147 MKFGKRLKQQIQDSLPEWRDKFLSYKELKKLVKLISAAPTRRNESLEYGKAESDFVYLLDIEIDKFNGFFMEQEEEFVIRHENLKQKIKRVVDLWGPNGIHPSEENYKEEMEKIRKAIVDFHGEMVLLVNYSNINYTGLAKILKKYDKRTGGLLRLPFIQKVLVQPFFTTDIISNLVKECESIIDTVFPAEEAAERAKEAIVVAGEGIFRNTVKALLTMQEIRKGSSTESPFSLPPLNLPDSDLIQSIQLNAAVPIV* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2265 257 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 255 - -
Ahy12g2265 257 Pfam SPX domain 102 161 IPR004331 -
Ahy12g2265 257 Pfam SPX domain 1 39 IPR004331 -
Ahy12g2265 257 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 255 IPR031142 GO:0016036
Ahy12g2265 257 ProSiteProfiles SPX domain profile. 1 160 IPR004331 -
Ahy12g2265 257 CDD SPX_AtSPX1_like 2 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2265 Ahy-Chr12 109614996 109619226 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2265 - - adu:107475702 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2265 12 109614996 109619226 Ahy12g2265 12 109614996 109619226 ECH
Ahy12g2265 12 109614996 109619226 Ahy2g1955 2 93921908 93926015 hybridization