Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2254 ATGGATTATTCTGCGTACCAACAACAACAGCAGCAGCAGCAGCAACAACAACAACAAGCATATTCATATGAGTATGATCCATCTCAAATCCAAGCTTACGATCAATCCTATGCGTATCAACAACCATATTATCCCTACACTCAACAATACGCGTATTATCCTGATCCAACTCAAGCTCACCTTCAATTCCAACCCGAATCCGCACCGGTTCACCCTCCCGGTGTCAATCCTGAACCGGCTCCTCAAAGACCCACGCACGCCCCGACTGCGCCATTTCAATACAGAGGTAGGGGTGGCAGGGGTGGTAGGTCGTTTAGAGGGGGTGGGCGAGGCCAGTTCAATCGCGGGAGGGGACGCGGACACTTCCCTGCTAACTCTTCTGCAACTGTCGTATCTGATGGTGTAGATTTGACTTCTGCTGCTGGGGTTACTTTAGTGGTGCAACCTTCGTCATCAACATCACCCAAACAAGCTCAAGTGCCTGGCGCACCACCACCACCACCACCACCTAAGGCATGGTGTGAAATTTGTAAGGTTGGATGTAATACTCTGGAAGTCATGGAACAACATAAGAATGGAAAGAAGCACAAGAAGAATGTGAAAGCCCGTGAAGAATTAGAGAGACAGAAGGCAATAAATGAACAAAAGAAAGAACAGATTCATACAGCTCAGCCTAAGACAGTCAAGGAGTCGGGGAACAATGGAGGCCCGCCAGAAAATATTGGCACTGAAGTTGCAGCTGCTAATCAAAATGACGAAGCACAGCTGCAGAATAACCTTGGAGAGACTTCAGCAGTTTCAGCTGAAGAGCCTGAGGGAAAATTCAGGGATAACACTGCTGGACGGGGACGGGGATTGAAGCGTAAGATGAGAGGGGGACGAGGATCTAAATCAATGAGGACTGGTGATGGATCAAGAAAGCCAGTGCAACCTCAAGCAGCCGAGCAGTTTGTGCCTTTTAAATGTGAATTGTGTAATGTCAAGTGTGAGTCCGAGGTTGTTTACCAGAGTCATGTGACCGGGAAAAAGCACTTGTCGAATCTCAAGCGTGCCCATGGCCCACAAGCTTTGTCCGGAATACTAGGGCTTCAACAAGCACTTAACCCCCCTGACATCAATGCCCTCTCAAATGCAATCAATGCTCAAGTCCAACAAGGTGATAATGATCCGCAAGTCCTTTTGGCTCAGCTTCTGATGAATGTATTATCTCAAGCACAAGCACAGGCACAAGGACAAACACCAGGAACTGCACCGCAGACTGGTCCCGTGGCTGCTCAGATGCTGGGTGCAGTGCCCTCTATTGCTGGATCCAGTTATGAACCCCAGCTGTCTCAGACACAAGCCTTGGAAATTATGGCACATGTTAATGCTCCGGAGGATTCTAACATCGGTTCCCAAAATGCAGGTGGAAATCGTGAATTGAAACAGCAGCATGAGTATCCCCAGCCTAGTTTAATTGCGACTTTATCAGACAACTCAGGGGCAGCAAATGACCAAATAGCTTCAGAGTGTGAAGCTTCCACCTCACAGAACCAAGATAAATGA 1545 0.4816 MDYSAYQQQQQQQQQQQQQAYSYEYDPSQIQAYDQSYAYQQPYYPYTQQYAYYPDPTQAHLQFQPESAPVHPPGVNPEPAPQRPTHAPTAPFQYRGRGGRGGRSFRGGGRGQFNRGRGRGHFPANSSATVVSDGVDLTSAAGVTLVVQPSSSTSPKQAQVPGAPPPPPPPKAWCEICKVGCNTLEVMEQHKNGKKHKKNVKAREELERQKAINEQKKEQIHTAQPKTVKESGNNGGPPENIGTEVAAANQNDEAQLQNNLGETSAVSAEEPEGKFRDNTAGRGRGLKRKMRGGRGSKSMRTGDGSRKPVQPQAAEQFVPFKCELCNVKCESEVVYQSHVTGKKHLSNLKRAHGPQALSGILGLQQALNPPDINALSNAINAQVQQGDNDPQVLLAQLLMNVLSQAQAQAQGQTPGTAPQTGPVAAQMLGAVPSIAGSSYEPQLSQTQALEIMAHVNAPEDSNIGSQNAGGNRELKQQHEYPQPSLIATLSDNSGAANDQIASECEASTSQNQDK* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2254 514 PANTHER OS06G0651300 PROTEIN-RELATED 80 463 - -
Ahy12g2254 514 SUPERFAMILY beta-beta-alpha zinc fingers 164 203 IPR036236 -
Ahy12g2254 514 MobiDBLite consensus disorder prediction 225 243 - -
Ahy12g2254 514 Pfam Zinc-finger of C2H2 type 173 196 - -
Ahy12g2254 514 Pfam Zinc-finger of C2H2 type 320 344 - -
Ahy12g2254 514 Gene3D Classic Zinc Finger 305 351 - -
Ahy12g2254 514 Gene3D Classic Zinc Finger 152 204 - -
Ahy12g2254 514 MobiDBLite consensus disorder prediction 1 23 - -
Ahy12g2254 514 MobiDBLite consensus disorder prediction 70 86 - -
Ahy12g2254 514 MobiDBLite consensus disorder prediction 263 311 - -
Ahy12g2254 514 MobiDBLite consensus disorder prediction 269 284 - -
Ahy12g2254 514 MobiDBLite consensus disorder prediction 459 514 - -
Ahy12g2254 514 MobiDBLite consensus disorder prediction 55 128 - -
Ahy12g2254 514 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 80 463 - -
Ahy12g2254 514 MobiDBLite consensus disorder prediction 212 243 - -
Ahy12g2254 514 MobiDBLite consensus disorder prediction 148 168 - -
Ahy12g2254 514 SUPERFAMILY beta-beta-alpha zinc fingers 299 351 IPR036236 -
Ahy12g2254 514 SMART ZnF_U1_5 169 203 IPR003604 GO:0003676|GO:0008270
Ahy12g2254 514 SMART ZnF_U1_5 317 351 IPR003604 GO:0003676|GO:0008270
Ahy12g2254 514 Coils Coil 199 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2254 Ahy-Chr12 109398504 109403888 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2254 - - adu:107475464 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2254 12 109398504 109403888 Ahy12g2254 12 109398504 109403888 ECH
Ahy12g2254 12 109398504 109403888 Ahy2g1947 2 93792456 93797847 hybridization