Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2200 ATGGAGCTTGACGGTGGTGGAAGAGCTGAGATTGATACATCGGCGCCTTTTGAATCCGTCAAGGAAGCTGTTTCTCGATTTGGCGGCCTTGGTTACTGGAAACCTATTCCCAATAATTCCCACATTCTACTTCAGCAGCGCCAAAATGAAGAGCTTGACCCTGGAAAACTGGAAGAGCAAGCAGCAGTTATGGAGAAAGAACTAATAGTAAAAGAAAGGGAAACACTTGAAGTCTTGAAAGAACTCGAAAGTACCAAAAAGCTTGTGGAAAACTTGAAATCAAAGCTTCAGAATGAAGAATCCGAAGCAAATTTGAGGCTTCAGATGAGTGTCTGCGATAACGTATCTTCTGTCAAGGACATAGAAGAGGATAAGGAAAACCGAGCCAATCTTGTTCTTCAGCTTTCAAATGAAGGTTGTATTTCATCGTCTCCGGGTTCAATATTAATGGAACTGAAGCAGGCGAAACTGAACCTGAACAGGACTACAAATGATATCGCTGATGTGCGGGTTGCTGTGGAATTGCTTAACAAGAAGTTAGAGAAGGAAAGGATCTCCCTAGAGAAAACCCGTGAGAGGCTAACTCAGAATTCTTCAAAAATATCTTCACTTGAGGAAGAGCTAAACCAAACTAGAATTAAACTACAAGTTGCAAAAGATGCTGAAATTAAGGGCAGTTTAGATGATCCTTCCGATATCACAAAAGAGCTACAGAGATTGAGTTCCGAGGCAGATCATTTCAAGAAAATGGGAGAAGCAGCGAGATCAGAAGTCATGAGAGCAATGTCTGAGATTGAGCAGACCAAGGCTATGATAAGAACTGCCGAGATCAGGTTGGTTGCTGCCAGGAAAATGAAGGAAGCAGCTATAGCAGCCGAAGATGCCGCGCTCGCAGAAATCAAAGCCTTATCACATGGTAGTTCACCCGGAGATGGTGAGCAAAAGCATGATGGGATTACTCTTTCCTTTGAGGAGTACACTGCCCTTACTGCCAAAGCTCGAGATGCCGAGGAGCATTCCAAGAAGAGAATCGTTGATGCTATGCTTCTAGTTGACGAAGCAAACTTATCGAAAATGGACATCTTGAAAAGGGTAGAGGAGGCAACAGAAGAAGTTAAAACCAGCAAGAAGGCCTTAGAAGAAGCTTTGGAGAGGGTAGAAGCTGCAAATAGAGGAAAGCTAGAAGTTGAAGAGGCTCTAAGGAAGTGGCGATCCGATGGTCACAAAAGGCGTTCTTCTATACACAACTCTGCCAAATTCAAGAATTCATACCCGTCTCACCTCCGTCGAGATTCGCGATTGCTCGACGTGAATGGGCTAAATCTGGAAAACAGTGAAGTGAATCCTGTTCTAAACCCAACCCTATCCATAGGACAGATATTGAGCCGGAAGTTAATGGTGCCAGATGATTTTGAGGCCAGGAGAAGCTCGGCCGAAGCAAGGAGAAGCTCGGCAAAACGGAAGGTGTCGCTTGGTCAGATGCTCGGCAAACATAGTTATTATGACCCAGATCAACCTTTTGACAGGCAAGTTGAGAAAGAGAATGGTCATCATCCACAGTTCTCTTCTGCAAAGAGAAAGAAATTTGGGTTTGCTAGATTCTCTCTTCTTTTGACAAAGCAACAAAAGAAAAAGAAGCCAATGCTGAACTTGAGGTGA 1659 0.4382 MELDGGGRAEIDTSAPFESVKEAVSRFGGLGYWKPIPNNSHILLQQRQNEELDPGKLEEQAAVMEKELIVKERETLEVLKELESTKKLVENLKSKLQNEESEANLRLQMSVCDNVSSVKDIEEDKENRANLVLQLSNEGCISSSPGSILMELKQAKLNLNRTTNDIADVRVAVELLNKKLEKERISLEKTRERLTQNSSKISSLEEELNQTRIKLQVAKDAEIKGSLDDPSDITKELQRLSSEADHFKKMGEAARSEVMRAMSEIEQTKAMIRTAEIRLVAARKMKEAAIAAEDAALAEIKALSHGSSPGDGEQKHDGITLSFEEYTALTAKARDAEEHSKKRIVDAMLLVDEANLSKMDILKRVEEATEEVKTSKKALEEALERVEAANRGKLEVEEALRKWRSDGHKRRSSIHNSAKFKNSYPSHLRRDSRLLDVNGLNLENSEVNPVLNPTLSIGQILSRKLMVPDDFEARRSSAEARRSSAKRKVSLGQMLGKHSYYDPDQPFDRQVEKENGHHPQFSSAKRKKFGFARFSLLLTKQQKKKKPMLNLR* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2200 552 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 5 546 - -
Ahy12g2200 552 Pfam Weak chloroplast movement under blue light 145 410 IPR008545 -
Ahy12g2200 552 Pfam Weak chloroplast movement under blue light 9 104 IPR008545 -
Ahy12g2200 552 MobiDBLite consensus disorder prediction 499 523 - -
Ahy12g2200 552 Coils Coil 79 102 - -
Ahy12g2200 552 Coils Coil 351 399 - -
Ahy12g2200 552 MobiDBLite consensus disorder prediction 502 521 - -
Ahy12g2200 552 Gene3D - 147 306 - -
Ahy12g2200 552 Coils Coil 152 221 - -
Ahy12g2200 552 PANTHER MYOSIN HEAVY CHAIN-LIKE 5 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2200 Ahy-Chr12 108123944 108126633 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2200 - - gmx:100783770 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2200 12 108123944 108126633 Ahy12g2200 12 108123944 108126633 ECH
Ahy12g2200 12 108123944 108126633 Ahy2g1911 2 92936983 92939656 hybridization
Ahy14g2089 14 118226085 118228501 Ahy12g2200 12 108123944 108126633 PCT
Ahy4g1822 4 107713897 107716338 Ahy12g2200 12 108123944 108126633 PCT
Ahy12g2200 12 108123944 108126633 Ahy14g2089 14 118226085 118228501 PCT
Ahy12g2200 12 108123944 108126633 Ahy4g1822 4 107713897 107716338 PCT