Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2179 ATGATGCAAAATCACCAGCAGCAGAAGCAGGGATTCGGCGGCGGAATCATTGGGCCGCAGTATTGTGCTCCATATAATGTTGACCTAGCAATTGTGAGGAAGGTGTTGACTTTGGCTGATGGTTTTAGTGTTACTGATATTAATGGACAAACCCTCTTCACCCTTAAGGGGTCCCTTTTGACCCTCCGGGACCACCGTGTCTTGCTCGACGCCGCCGGAACACCCGTTGTTACTCTTCGCCGGAAGCTTATGACGGCACATGATCGGTGGCAAGTGTTCAGGGGTGATAGCTCAGATATGAAAGATTTGATCTTCAGTTTAAAGAGATCATCTCTCTTCCAGCTGAAGACCAAATTAGACGTGTTCTTAGCCCATAATACAGAAGAAAAAGTTTGTGATTTTAAGGTTAAAGGAAGTTGGTTCGAGAGATCTTGTGTTATTTATGCTGGTGAATCTCTCAACATTGTGGCACAGATGCACAAGAAGCACACTGCTCAAAGCATTATGTTTGGGAAAGACAATTTCATGGTCACAGTGTATCCCAACGTTGACTATGCCTTCATAGTTGCCCTAATTGTGATCCTTGACGAAATCAACCAAGACAAGAACAGTGATTCATAA 621 0.4428 MMQNHQQQKQGFGGGIIGPQYCAPYNVDLAIVRKVLTLADGFSVTDINGQTLFTLKGSLLTLRDHRVLLDAAGTPVVTLRRKLMTAHDRWQVFRGDSSDMKDLIFSLKRSSLFQLKTKLDVFLAHNTEEKVCDFKVKGSWFERSCVIYAGESLNIVAQMHKKHTAQSIMFGKDNFMVTVYPNVDYAFIVALIVILDEINQDKNSDS* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2179 206 SUPERFAMILY Tubby C-terminal domain-like 16 199 IPR025659 -
Ahy12g2179 206 Gene3D - 14 204 IPR038595 -
Ahy12g2179 206 Pfam LURP-one-related 18 194 IPR007612 -
Ahy12g2179 206 PANTHER - 15 204 IPR007612 -
Ahy12g2179 206 PANTHER TUBBY C 2 PROTEIN 15 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2179 Ahy-Chr12 107751299 107753097 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2179 - - gmx:100527088 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2179 12 107751299 107753097 Ahy12g2179 12 107751299 107753097 ECH
Ahy12g2179 12 107751299 107753097 Ahy2g1897 2 92690414 92692197 hybridization
Ahy14g2058 14 116386111 116399877 Ahy12g2179 12 107751299 107753097 PCT
Ahy12g2179 12 107751299 107753097 Ahy14g2058 14 116386111 116399877 PCT