Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2171 ATGCTAGTGATTGGACAAAGCTTGCAAGAAACAACCTTGGATGAAACTCAAAACCCAAATGGTTTTCTTGAGGTTAATGATGAAAGGCTTCATCAAAAACTGAACAACAGAATGTTGAGAATTATTTCCAACATGTTCAAACCTCAGAGACTCATTTCACATTTTTTACAGGAAAATCTTATGAATCCTTTCAAGAATGCTATTTTTTCCAAGAAGAAGATTGATTGGTCATGTATTAGCACAACTTGCAAGCAATGGATCAAGAATCCTTTGAACATGGCACTTCTTCTATGGATAACTTGTGTCATCATCTCCGGCGCGATTCTCTTCCTAGTTATGACAGGAATGCTAAACAGAATCCTCACCAAGAAATCCCAAAGAGATGAATGGTTTGAAGCAAACAACCAAATCCTCAATGCTCTATTCACTCTCATGTGTCTATACCAACATCCGAAGAGATTCTACCATCTTGTTCTTCTTCTTAGGTGGAAACAAGAAGACATAACAATCCTCAGAAACTTGTATTGCAAGAATGGAAATCCCAAGCCTCATGAATTTTTCCACATGATGGTTGTTATTGTATTACTCCATGTTAATTGCTTTGCTCAATATGCATTATGCAGCCTTAATTTAGGGTTCGACCGGTCTAAAAGGCCGGCCGTTGGAGTTGGTATATGCATCTCGATCGCAATTGCTGCTCCAATTTTCGCAGGACTATACTGCTTTGTTAGCCCTCTAGGCAAGGAATATGAATCTGATGAAGTACATTGTTCAACCAGTTCAAGATTACCGTCCGAAATGAGCTTTTCTTTTGCATCAAGAAATGATCATGGCCTTGTTGTTATTGAGTATGCACCTGAATGGAGAGGAGGGCTATTTGATCTTAAGCAAAATCTTTCTGTTGCATACCAAACACTCTTCTGTGGTTTTTGCACTTTTGGAAGGAACATGAAAAGGCTTCACTTTGTTTTTGGTTTACTCTATGGTGGATATTGGAGGATTCAAATGAGGAAAAGGTTCAATTTGCCACCAAATAATAATAGTAAACTTTGTTGTGGGAATCAAAATGTTAGAGATTGCATGCAATGGCTATTGTGTTGTTGGTGTTCTCTTGCACAAGAAGTTAGAACAGTGGAATTCTATGACATAGTTGAAGATAAATTCTCATGCAAAAATCAGAATCATGGAATGTTCAATTCTTCTTCACTTTGGAGCAGTCCTAGTTTGTCTAATAAGGTTTGCTCTGAAGAGTACTCCGATTATCATCATTATTATTCTGGAGAGAAACAGAAAAATCATGTTATGGAGGCTCCAATTGCACTGAGAATTAATGTGGAAGATAGTGTCATTAGAAGAACATGA 1362 0.3744 MLVIGQSLQETTLDETQNPNGFLEVNDERLHQKLNNRMLRIISNMFKPQRLISHFLQENLMNPFKNAIFSKKKIDWSCISTTCKQWIKNPLNMALLLWITCVIISGAILFLVMTGMLNRILTKKSQRDEWFEANNQILNALFTLMCLYQHPKRFYHLVLLLRWKQEDITILRNLYCKNGNPKPHEFFHMMVVIVLLHVNCFAQYALCSLNLGFDRSKRPAVGVGICISIAIAAPIFAGLYCFVSPLGKEYESDEVHCSTSSRLPSEMSFSFASRNDHGLVVIEYAPEWRGGLFDLKQNLSVAYQTLFCGFCTFGRNMKRLHFVFGLLYGGYWRIQMRKRFNLPPNNNSKLCCGNQNVRDCMQWLLCCWCSLAQEVRTVEFYDIVEDKFSCKNQNHGMFNSSSLWSSPSLSNKVCSEEYSDYHHYYSGEKQKNHVMEAPIALRINVEDSVIRRT* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2171 453 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 287 379 IPR006461 -
Ahy12g2171 453 PANTHER - 323 407 - -
Ahy12g2171 453 Pfam Protein of unknown function (DUF2985) 85 163 IPR021369 -
Ahy12g2171 453 PANTHER PLAC8 FAMILY PROTEIN-RELATED 58 322 - -
Ahy12g2171 453 Pfam PLAC8 family 288 376 IPR006461 -
Ahy12g2171 453 PANTHER - 58 322 - -
Ahy12g2171 453 PANTHER PLAC8 FAMILY PROTEIN-RELATED 323 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2171 Ahy-Chr12 107432369 107434720 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2171 - - aip:107625841 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2171 12 107432369 107434720 Ahy12g2171 12 107432369 107434720 ECH
Ahy12g2171 12 107432369 107434720 Ahy2g1893 2 92605300 92607671 hybridization