Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2125 ATGATGGGTGCAGGTAGGAAAACACAACCTGTTGGTCCACCATATTCAGAGATCAGTTTTCCATTCTGTCGAAATCTAAGGAAGAATCAACTTGGTGGTGTCATATTTGGTTGCAAGAACAGTACATTGAAAGAATGCTTATCTAAACAACTCTTTGGCTTACCAGCTCTGCATTATTTCTATGTGAAGAACATTGAACCTGGGTTGCCACTGTTTTTGTTCAACTATAGTGATAGGAAGATTCATGGTATTTTTGAGGCAGCTAGCAAAGGACAAATGTATATTGATCACCATGCTTGGTCTGTGGATTGTTCAGAGATAACACAATATCCTGCACAGGTGAAAGTTCGCGTCCGACTTCAGTGCCAGCCATTGTCTGAAGATAGATTTGGACAAATAATCAAAGAAAACTACTTCAGTCGCAACCATTTCTGGTTTGAGCTAGACCATATACAAGCAAACAAGCTGAACTCTCTACTAGTGTTTTCAGCATTGGCACCTGCTACTCCTTCGCCGCAGAGTATGAAGTGGAGGGCAGTACCTCAACCTCTTCCATCACATGAAACTCCTCCAAAGAAAGGTGAATCATTCGAAATGCCTGAATCAGAGGCAGAGCATTTTACTGATTCGAGTGGAACAAACTCCATCGAGATAACTTCTTCCTTAGATGGAGATGATCAATTGGATACTCACATAGCTGTGAATGAGGTAAAAGAGGATGAAAAAGACCTTGTACACATGAAGCTAAAGGCATTGTCTCTTGGCCGCAAAATTCAAGACCTCTCTTTGCCGGACAATCCAAATGCAGCTCCCAATAACAACTCAAATGTCAATGAGGATGAGAATAATAATCAGTTCTCTGTCAAAAAGAGTGATCAAGAGGTTCCACCTGAAGTAGAGAAGAATGAAGAGAGTTTAAGCCCTCCATTTGAGTATCAACAGTCGATAGAGCAGATGAAGCAAGAGTTTGAAGAGCTGGCAACTTTCAAGAAAATACAAACTCAGAAGAGTAGTTACCTTGAACGGAAGCTGATTGAGGCGACATTGGAAATTCAGCATTTAAAAGATCGTTGTATAATGCTAGAATCTGCATGTAATCTTCCTCTAGCACCTGTTGAGAAGATAGCCATTGAATCATCTGAGGAGATGCACTTAGACAATAGAGAGTCATTGTTTCTAATAGGAGGTTTCGATGGAGAATCATGGTTATCAGCTATGGATTTGTATTGGCCTTCCCAGAATGTGGTCAAGTCTCTTAAGCCTATGAGCATAGTTCGCTCATATTCTTCGGTAGTAAAGTTAAATGGTGAAATTTATGTTTTCGGTGGTGGAGATGGTAATGTCTGGTATGACACAGTTGAATCATACAGTCCATTCCACAACGAGTGGACTTCGCGCCCTTCTTTGAATCAGAAGAAAGGATGCTTGGCTGGAGCTGCCTTGAGTGACAAGATATTTTCAATTGGTGGTGGCGATGGAGATAGCTGTTTTTCAGACGTTGAGATGCTTGATTTGGAAGTTGGACGGTGGATTTCGACACGTTCAATGCTGAATAAGAGATTTGCAGTTGCTGCTGCAGAACTCAATGGTGCATTATATGTTACTGGTGGATATAATGGAGTTGATTATTTGAAGTCTGCTGAAAGATTTGATCCTAGGGAACATTCATGGACCAAAATACCAGACATGAATACAAGGCGGGGCTGCCACTCCATGGTTGTGTTGAATGGGAAATTGCATGCACTTGGTGGCTTTGATGGAAGCACAATGGTGTCGAGCGTTGAAGTGTTTGATCCTCGTCGCGAAGCATGGATAACCGGGGAACAAATGAATCAACCTAGGGGATATTTTGCTGCTGCTGTTGTTAAAGAAACTATACATGTAATTGGGGGAGTCAAGGTTGGAGAGAACATCGTAGAAAGGGTTGAGAATTATAAGGAGGATAAAGGATGGCAAGAAAATTGCACAAAAATGGTTGGAAAAAGGTGTTTTTGTTCGGCTATTGCCCTTTAG 2013 0.4143 MMGAGRKTQPVGPPYSEISFPFCRNLRKNQLGGVIFGCKNSTLKECLSKQLFGLPALHYFYVKNIEPGLPLFLFNYSDRKIHGIFEAASKGQMYIDHHAWSVDCSEITQYPAQVKVRVRLQCQPLSEDRFGQIIKENYFSRNHFWFELDHIQANKLNSLLVFSALAPATPSPQSMKWRAVPQPLPSHETPPKKGESFEMPESEAEHFTDSSGTNSIEITSSLDGDDQLDTHIAVNEVKEDEKDLVHMKLKALSLGRKIQDLSLPDNPNAAPNNNSNVNEDENNNQFSVKKSDQEVPPEVEKNEESLSPPFEYQQSIEQMKQEFEELATFKKIQTQKSSYLERKLIEATLEIQHLKDRCIMLESACNLPLAPVEKIAIESSEEMHLDNRESLFLIGGFDGESWLSAMDLYWPSQNVVKSLKPMSIVRSYSSVVKLNGEIYVFGGGDGNVWYDTVESYSPFHNEWTSRPSLNQKKGCLAGAALSDKIFSIGGGDGDSCFSDVEMLDLEVGRWISTRSMLNKRFAVAAAELNGALYVTGGYNGVDYLKSAERFDPREHSWTKIPDMNTRRGCHSMVVLNGKLHALGGFDGSTMVSSVEVFDPRREAWITGEQMNQPRGYFAAAVVKETIHVIGGVKVGENIVERVENYKEDKGWQENCTKMVGKRCFCSAIAL* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2125 670 Gene3D - 378 668 IPR015915 GO:0005515
Ahy12g2125 670 MobiDBLite consensus disorder prediction 265 291 - -
Ahy12g2125 670 SMART kelc_smart 531 577 IPR006652 GO:0005515
Ahy12g2125 670 SMART kelc_smart 578 624 IPR006652 GO:0005515
Ahy12g2125 670 SMART kelc_smart 437 483 IPR006652 GO:0005515
Ahy12g2125 670 SMART kelc_smart 484 530 IPR006652 GO:0005515
Ahy12g2125 670 SMART kelc_smart 390 436 IPR006652 GO:0005515
Ahy12g2125 670 MobiDBLite consensus disorder prediction 169 223 - -
Ahy12g2125 670 MobiDBLite consensus disorder prediction 260 307 - -
Ahy12g2125 670 PANTHER - 23 670 IPR044832 GO:0034976
Ahy12g2125 670 MobiDBLite consensus disorder prediction 191 205 - -
Ahy12g2125 670 ProSiteProfiles DCD domain profile. 29 162 IPR013989 -
Ahy12g2125 670 SMART dcd 29 162 IPR013989 -
Ahy12g2125 670 SUPERFAMILY Kelch motif 390 668 IPR015915 GO:0005515
Ahy12g2125 670 PANTHER INFLUENZA VIRUS NS1A-BINDING PROTEIN 23 670 - -
Ahy12g2125 670 Pfam Kelch motif 477 516 IPR006652 GO:0005515
Ahy12g2125 670 Pfam Kelch motif 521 564 IPR006652 GO:0005515
Ahy12g2125 670 Pfam Kelch motif 426 469 IPR006652 GO:0005515
Ahy12g2125 670 Pfam Kelch motif 566 610 IPR006652 GO:0005515
Ahy12g2125 670 MobiDBLite consensus disorder prediction 206 223 - -
Ahy12g2125 670 Pfam Development and cell death domain 32 159 IPR013989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2125 Ahy-Chr12 106436597 106440726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2125 532 651 EF-hand Containing Proteins AT4G39560 27.820 1.70e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2125 - - pvu:PHAVU_008G092000g 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2125 12 106436597 106440726 Ahy12g2125 12 106436597 106440726 ECH
Ahy12g2125 12 106436597 106440726 Ahy2g1858 2 91852763 91856862 hybridization
Ahy14g2004 14 113522160 113527603 Ahy12g2125 12 106436597 106440726 PCT
Ahy4g1758 4 103579531 103585132 Ahy12g2125 12 106436597 106440726 PCT
Ahy12g2125 12 106436597 106440726 Ahy14g2004 14 113522160 113527603 PCT
Ahy12g2125 12 106436597 106440726 Ahy4g1758 4 103579531 103585132 PCT