Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2107 ATGGATGCGATAGCAGGCAAAGTTGGATCCTATTGGTTCAATCAAAAGGCCAAGGGGGAACTTAGTTCCGTTGGTAATGACATCAACTCACTGCAAAGCAGTATTGAAGGAGGAGCAAAATGGTTGGTTAACAAAGTAAAAGGATCGGTTCAAAAGCCATTGCCGGAATTGCTAAAGGAGTATGATCTACCAAGTGGACTCTTCCCTAAAGATGCAACAAACTATGAGTTCAATCCAGAGACAGGAAAACTAGTTGTTAACATTCCTCAAGTATGTGAGGTCGGTTACAGGGATCAAACAGTCATGCGATTCTCCACCACGGTGATTGGTCAACTTGGAAAAGGAAAACTAGCTGAGATAGAGGGAATGAAGACAAAAGTAATTATCTGGGTTAAGCTTACCATGGTTTGGACCGACGAATCGAAACTCTACGTGAGTGCTGGCCTAAAGAGAACAAGGAGTAGAGAGGCATATGAGGTTATAAGAAATGGTATTTGTGTAGATAGGTTCTGA 513 0.4211 MDAIAGKVGSYWFNQKAKGELSSVGNDINSLQSSIEGGAKWLVNKVKGSVQKPLPELLKEYDLPSGLFPKDATNYEFNPETGKLVVNIPQVCEVGYRDQTVMRFSTTVIGQLGKGKLAEIEGMKTKVIIWVKLTMVWTDESKLYVSAGLKRTRSREAYEVIRNGICVDRF* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2107 170 Pfam Protein of unknown function, DUF538 56 159 IPR007493 -
Ahy12g2107 170 SUPERFAMILY At5g01610-like 3 169 IPR036758 -
Ahy12g2107 170 PANTHER - 13 170 - -
Ahy12g2107 170 Gene3D - 32 170 IPR036758 -
Ahy12g2107 170 PANTHER T31J12.3 PROTEIN-RELATED 13 170 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2107 Ahy-Chr12 106066254 106068010 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2107 - - gmx:100500143 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2107 12 106066254 106068010 Ahy12g2107 12 106066254 106068010 ECH
Ahy12g2107 12 106066254 106068010 Ahy2g1840 2 91593042 91594792 hybridization
Ahy14g1966 14 111711412 111714313 Ahy12g2107 12 106066254 106068010 PCT
Ahy4g1737 4 102722255 102725091 Ahy12g2107 12 106066254 106068010 PCT
Ahy12g2107 12 106066254 106068010 Ahy14g1966 14 111711412 111714313 PCT
Ahy12g2107 12 106066254 106068010 Ahy4g1737 4 102722255 102725091 PCT