Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2105 ATGGCTTCCATTAACAACTTCAACCCTTTCGGTGGCAACTGGTTCAACAAACCCCAAAACCCTCTCCCTGCTGTCAACTTCAACATCCTTGGATTCTTCGAACACAACGCCAACTCTCCGCCCTTCGCCGCCATTGGGCTCCCGAGGTTCTTCCGCAGAAGGCCCAAGAAGCCCAACAATGGAGAACCTGGCCACTTCACTCAGATGGCTCACCAGTTCTTCTGGGAATGCGAGAACATCCCTGATTACAGGCACACTCCGGAAGTAGAAAAGATTCTAAAACAAGACGAGCTCAACCCCTACGTGGAGGAGAGGGAGAATCCCACTGAGGAAGAGATAAGGGAGAACGAGGAGTGGATTGAGAAGTTGAAGAATAGCCCTGTTATGAAGTTTCTCTTGAGAGCCGAGGAGATCAGGGACAAGATGAACGAGCTTGATTTGGAGGAGAACAAGAGACCTTACCACAAGGAGGATTGGGAGGTGTGGAAGGCAGTGCCGCATGTCACTGGCCCCGATGGGCGACCAATGCCTAGGAAGGCACTGAAGACCGATAGCGAGGCCGATGACAAGTTTTGGGACTTTGCGAGGCAGTTCTTCTTTGGGCTGTGGGGGTTCAGGCAGCGGCCTTACCCACCTGGGAGGCCTAGTGATGCTGCTCAGTCAATTGGGTACAAGAACCTTGAGAGGCGATACTATGATTTTATCATGAGGAGTGGTGGATGGTACTATAAGGACCGGCTAGGTCGTACACGAGGGCCTCTGGAGTTAATTACGCTTAAAACTGCTTGGGGTGCTGGAATTATTGATAAGAACACTTTCATTTGGGGCGAAGATATGGATGAGTGGGCTCCAATCCACATGATTTATGGAATGGAGCGTGCAATTGCTACATGGGAAGTTAGACTTGCTGCTTCAGCAACGGCTCTTCTCCACAAACTTCAGAAGGGCATACCGCCATGGGTTCCTCTCAAGGGATTTGAAAAGAAGACTTATAAGCAGCTTCAAGAAGAGGCTATAGAAAGCAAGAGACGTGATTTAGCGGTGTTAGAAGCTAATGACGGTGTTTGGCCAGGAGTTAGAATTCCAAGTCATGCCCTATTTCTTTGGGCTAGTGGCTCTGAACTCACCACTATTTTGGAAGAGGATCACATGCCCAACAAGTACATTCCTAGACATCTTAGGTTGCAGTTGGCAAAAATTATTCCAGGTTTGAGGCCATGGGAAGTTCTGAGTATAGAACAAGCAATGGATCAAATAACATTTAATGGCCAGTGGTACCGTGAACCACTCGGCTCATTCCAGACTGGTCCGCCATACATCCAGCACTGGAATAAGGACATGATGAGGTTATATAAGATATTCGAAGATCTCAACGACGAGGTGTACGAAAACTTGGTGAGGAACCTCCCGGGATTTGATAAAATTGCAGAGAAGGTTCAGAGAGATTTTATTACAAGAATCAATAAACTGTTGGAGAAGAGAGAAGCGGAGAAAAGGCGGCGGCGGCAGCTTGGCAGATGA 1521 0.4832 MASINNFNPFGGNWFNKPQNPLPAVNFNILGFFEHNANSPPFAAIGLPRFFRRRPKKPNNGEPGHFTQMAHQFFWECENIPDYRHTPEVEKILKQDELNPYVEERENPTEEEIRENEEWIEKLKNSPVMKFLLRAEEIRDKMNELDLEENKRPYHKEDWEVWKAVPHVTGPDGRPMPRKALKTDSEADDKFWDFARQFFFGLWGFRQRPYPPGRPSDAAQSIGYKNLERRYYDFIMRSGGWYYKDRLGRTRGPLELITLKTAWGAGIIDKNTFIWGEDMDEWAPIHMIYGMERAIATWEVRLAASATALLHKLQKGIPPWVPLKGFEKKTYKQLQEEAIESKRRDLAVLEANDGVWPGVRIPSHALFLWASGSELTTILEEDHMPNKYIPRHLRLQLAKIIPGLRPWEVLSIEQAMDQITFNGQWYREPLGSFQTGPPYIQHWNKDMMRLYKIFEDLNDEVYENLVRNLPGFDKIAEKVQRDFITRINKLLEKREAEKRRRRQLGR* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2105 506 Coils Coil 332 352 - -
Ahy12g2105 506 Pfam GYF domain 2 241 287 IPR025640 -
Ahy12g2105 506 PANTHER PROTEIN TIC 56, CHLOROPLASTIC 1 502 IPR037471 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2105 Ahy-Chr12 106027952 106032797 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2105 - - gmx:100781480 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2105 12 106027952 106032797 Ahy12g2105 12 106027952 106032797 ECH
Ahy12g2105 12 106027952 106032797 Ahy2g1837 2 91547710 91552586 hybridization