Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2071 ATGCAATATTTGCGGAGTTTGAATTTGGCTTATAATGAATTCCACTTTGAAATTTATTCTGAGTTCAAAAACCTGAAGAATCTCAGGTATCTGAATTTGTCAAATGCTGGTTTCATGGGGCAAATTCCACCTGAAATCTCTTACTTGATCAAGTTGGAGACTCTTGATTTGTCTACCACAATCACTTCATCATCAAAACATGGTTTGAAACTTGAGAAGCCAAACATGGTAGAGTTTGTGCAAAACTTTACAAGAATGAAAGAACTGTATCTAGATGGTGTTGCAATTTCAGCCAAAGGAGAGGACTGGTGCCATGCTGTATCTTCCCTGCAAAGTCTACAAGTTTTGAGTATGTCATCTTGCAATCTCTCTGGTCCTCTTGATTCTTCATTGACAAAGCTTCAATCTCTCTCAATACTTCAACTAGACCATAACAATTTGGCAAGCCCAATTCCTGAGTACCTTGGTAATTTGTCTAATTTAACCACTTTGCAACTCAGAAGTTGTGGTTTGAGTGGAGTCTTTCCAAAAAATATCTTCCAAATTTCATCACTTCATGTCCTTGATGTGTCAGATAATCAAGGCCTTCATGGTTCTTTATCAAACTTTCTACATCAAAGATCTCTCCATTACTTGAATCTTAGCCGCACAAATTTCTCAGGACCTTTACCACAGTCTATTAACAAGTTAAGACAATTGTCAACACTAGATCTATCAAATTGCCAATTCAATGGGACAATTTCCAATTCATTGTCCGATCTTGCCGAACTTGTTTATCTTGATTTGTCATTCAATAATCTTACTGGTCCTCTTCCATCTTTCAATAGGTCCAAGGCTCTGAGAATCTTGTATCTTACTCATAATTATCTAAAGGGCACACTTTCACCCACCCATTTTGAAGGCCTTATAGATCTTGTGAGCATTAATTTAGAAGTTAACTCTCTAGATGGAAGACTTCCTTCATCTTTGTTTACACTTCCATCTCTGCAGCTGCTCTTTCTTGCTGACAATAGATTTGATGGCCAACTTGAAGAGTTCCCAAATGGTTCCTCCTCATCATTAGAGATGCTTGATTTAAGTGAAAACAATTTTGAAGGGCGTGTTCCTTTGTCTATCTTTCAACTGAAAAGTCTCAGTTTACTTCAACTTTCCACAAACAAGTTCAATGGCACCATACAATTGAGTGTTGTTCAAAGGCTACAAAATTTGGCAACACTTGGTCTCTCAAACAACAACTTGTTAATTGTGGATGACAATGATCTTCCATTCCCCAAGTTGATCAATCTTTGGTTGGCTTCATGTAAGTTGACGGTATTTCCTGCATTTTTGAGAAATCAGTCTTCTTTACTCTTTTTAGATTTGTCCAACAACCAAATTGAAGGAACAATACCCAATTGGATTTGGAGACTTGAAATTCTATGCTTCTTGAATCTTTCCAACAATTTTTTGACTGATATGGAAGGTCCTTTCCAAAATCTTAGTTCAATTTTGTTCTACCTTGATCTTCATGGAAATCAATTACAAGGACCAGCACCCATTTTCACAAAAAATATTGTTCATCTGGACTACTCAAATAATAGATTCAGTTCTATTACACCATCAGATATTGGTAATTCTATTCCTGACTCAGTTGATATATTTTTCTCAAACAACAATTTTTATGTAAAAATCGATGAATCCATTTGCAATATTTCAACTCTTAGAATGCTTGATCTTTCATATAATGGCTTCATTGGCAACATTCCTGAGTGCTTGACAACAAGGAAGAGTAGCTCTCTGAAACTATTAAATCTTGCTGGAAACAAACTCAATGGCCACATTTCAGATACATTATTCTCAACTTCATGTTCTCTAAGGTTTATAGATCTCAATGGAAATCTTTTAAATGGAGGCCTCCCAAAATCTTTGGCTAACTGCCAAAATCTCCAACTCCTAAATGTTGGAAACAATCAATTAATGGACGAGTTCCCCTGCTTCTTGAAGAACATTTCTTCGCTAAGTGTCATGGTTTTAAGGTCAAATAAGTTCTATGGACAGATTGGATGCCCCAATGTGATTGGCGATTGGGAAAAGCTTCAAATTGTTGATGTAGCAGACAACAAATTTAGTGGCATGTTACCAACAACACTCTTTCAGACTTGGAAAGAATTGATGTCTGATGATGAAGATAAAGATAAATCAAGATTTGGACATTTATCTTTTAATTTTTATGATATCAACATCAATTATTCAGTGAATCTTGATGCTATAACTACAATTTTCTCTAAGAGCAGCAAAATGAAGTTAGCCAAACTTGTTACAGTTGAGCCACTTTATGTGTTAGATCACTTGCTCTCTCATGTCTATGGAGAGGTTTCAGGTCTTCGTAGGTATGCGGATTCAGTTACCATTGTAATCAAAGGTCAACAAATGAAGTTGGAAAAGATTCTCATTGCATTCACTTCATTGGATTTCTCATCCAACCAATTTGAAGGGCCAATACCAGAAGAGATCATGAGTTTCAAAGCACTGCATGCTCTTAACTTGTCTCACAATGCATTCTCAGGCCATATTCCTTCAACTTTGGGAAACTTGAGAAATCTTGAATCCTTAGACTTGTCAATGAATTCTCTGAGGGGAGAGATTCCAACTGAGCTTGCAAGCTTATCTTTTCTTGCCATCATGAATCTCTCCTATAATCATCTTGTAGGGAGAATTCCAACAGGCACTCAAATTCAATCGTTTGGAGCAAATTCATTTGTGGGAAATGAAGCGTTATGTGGACCTCCATTGACACAAGGTTGTGGTGGAGAAGAGCAAGGGTTGTTACCAACATCATCTAAAACTACTAACTCTCATGGTAGTAGTTCAGTTAATTGGAGTTTGTTAAGTGTAGAGTTGGGATTCACTTTTGGGTTTGGAATATTCATGATGCCACTGATTTTGTGGAAGAAATGGAGGTTGTGGTACTCCAAGAAAGTAGAGGAAGCTCTATACAAGATTGTGCCTCAACTTGATTTTGTATATGAACGTCGTGGTGGGAAGAGATATAGATCTTTAAGATGGAAGCCTTATTGA 3057 0.367 MQYLRSLNLAYNEFHFEIYSEFKNLKNLRYLNLSNAGFMGQIPPEISYLIKLETLDLSTTITSSSKHGLKLEKPNMVEFVQNFTRMKELYLDGVAISAKGEDWCHAVSSLQSLQVLSMSSCNLSGPLDSSLTKLQSLSILQLDHNNLASPIPEYLGNLSNLTTLQLRSCGLSGVFPKNIFQISSLHVLDVSDNQGLHGSLSNFLHQRSLHYLNLSRTNFSGPLPQSINKLRQLSTLDLSNCQFNGTISNSLSDLAELVYLDLSFNNLTGPLPSFNRSKALRILYLTHNYLKGTLSPTHFEGLIDLVSINLEVNSLDGRLPSSLFTLPSLQLLFLADNRFDGQLEEFPNGSSSSLEMLDLSENNFEGRVPLSIFQLKSLSLLQLSTNKFNGTIQLSVVQRLQNLATLGLSNNNLLIVDDNDLPFPKLINLWLASCKLTVFPAFLRNQSSLLFLDLSNNQIEGTIPNWIWRLEILCFLNLSNNFLTDMEGPFQNLSSILFYLDLHGNQLQGPAPIFTKNIVHLDYSNNRFSSITPSDIGNSIPDSVDIFFSNNNFYVKIDESICNISTLRMLDLSYNGFIGNIPECLTTRKSSSLKLLNLAGNKLNGHISDTLFSTSCSLRFIDLNGNLLNGGLPKSLANCQNLQLLNVGNNQLMDEFPCFLKNISSLSVMVLRSNKFYGQIGCPNVIGDWEKLQIVDVADNKFSGMLPTTLFQTWKELMSDDEDKDKSRFGHLSFNFYDININYSVNLDAITTIFSKSSKMKLAKLVTVEPLYVLDHLLSHVYGEVSGLRRYADSVTIVIKGQQMKLEKILIAFTSLDFSSNQFEGPIPEEIMSFKALHALNLSHNAFSGHIPSTLGNLRNLESLDLSMNSLRGEIPTELASLSFLAIMNLSYNHLVGRIPTGTQIQSFGANSFVGNEALCGPPLTQGCGGEEQGLLPTSSKTTNSHGSSSVNWSLLSVELGFTFGFGIFMMPLILWKKWRLWYSKKVEEALYKIVPQLDFVYERRGGKRYRSLRWKPY* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2071 1018 Gene3D Ribonuclease Inhibitor 419 515 IPR032675 -
Ahy12g2071 1018 Gene3D Ribonuclease Inhibitor 301 418 IPR032675 -
Ahy12g2071 1018 Gene3D Ribonuclease Inhibitor 199 300 IPR032675 -
Ahy12g2071 1018 Gene3D Ribonuclease Inhibitor 1 104 IPR032675 -
Ahy12g2071 1018 Gene3D Ribonuclease Inhibitor 105 198 IPR032675 -
Ahy12g2071 1018 SMART LRR_typ_2 326 353 IPR003591 -
Ahy12g2071 1018 SMART LRR_typ_2 254 277 IPR003591 -
Ahy12g2071 1018 SMART LRR_typ_2 470 492 IPR003591 -
Ahy12g2071 1018 SMART LRR_typ_2 400 423 IPR003591 -
Ahy12g2071 1018 SMART LRR_typ_2 25 49 IPR003591 -
Ahy12g2071 1018 SMART LRR_typ_2 858 886 IPR003591 -
Ahy12g2071 1018 SMART LRR_typ_2 134 158 IPR003591 -
Ahy12g2071 1018 Pfam Leucine Rich Repeat 233 253 IPR001611 GO:0005515
Ahy12g2071 1018 Pfam Leucine rich repeat 279 339 IPR001611 GO:0005515
Ahy12g2071 1018 SUPERFAMILY Outer arm dynein light chain 1 395 533 - -
Ahy12g2071 1018 SUPERFAMILY RNI-like 80 413 - -
Ahy12g2071 1018 Gene3D Ribonuclease Inhibitor 516 934 IPR032675 -
Ahy12g2071 1018 PANTHER LEUCINE-RICH REPEAT-CONTAINING, PLANT-TYPE, LEUCINE-RICH REPEAT DOMAIN, L-RELATED 4 1001 - -
Ahy12g2071 1018 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 4 1001 - -
Ahy12g2071 1018 PRINTS Leucine-rich repeat signature 858 871 - -
Ahy12g2071 1018 PRINTS Leucine-rich repeat signature 449 462 - -
Ahy12g2071 1018 SUPERFAMILY L domain-like 2 95 - -
Ahy12g2071 1018 SUPERFAMILY L domain-like 516 911 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2071 Ahy-Chr12 105219727 105222783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2071 18 985 Receptor kinase-like Gene Family AT1G47890 33.909 3.01e-121 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2071 - - aip:107627695 1736.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2071 12 105219727 105222783 Ahy2g1806 2 90848449 90851808 hybridization